Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185134

Identifier: 159185134

GI number: 159185134

Start: 2244578

End: 2245324

Strand: Direct

Name: 159185134

Synonym: Atu2272

Alternate gene names: NA

Gene position: 2244578-2245324 (Clockwise)

Preceding gene: 159185133

Following gene: 15889552

Centisome position: 78.99

GC content: 65.06

Gene sequence:

>747_bases
ATGTCACCGGAAGAAAGCCAGCTTCTCAAGGGGCTGTTCGACAGGACCAAAACCGCATCCGCCACCCCGCGTGACCGCGA
GGCGGAAACATTGATCGCAGACGCCGTGCGCGATCAGCCCGCAGCTCCCTATTATCTCGCCCAGGCGGTGATCGTTCAGG
AAAAGGGTCTGGAAGCGGCAGCCGCCCATATCAAACAGCTCGAAGACCGCATCCATGCGCTGGAAAGCGGTGGCAGCGCC
CCGCAGGCGGCGGCGCAGGGCGGTTTCCTCAGTTCCATCTTCGGCACCGGCCAGCCGCAGCCGCCCGCACCTGCACCAGC
CCCGGCGGCTGCACCAGGCTCCTGGCGTAACGATACCGCCGGCCAGACTGCCGGCCCTTGGGGCGCACCTGCCGCTCAGC
AATCAGCCGGGCCCTGGAGCCAGCAACCCGCCGCCGTCGGACGTTCGGGTGGCGGCTTTTTGCAGGGCGCGCTCGGCACC
GCCGCAGGTGTCGCCGGCGGCATGCTGCTTGCCAATTCGCTGAGCGGCATTTTCGGCAGCCACATGTCGTCGCTTGGCCT
TGGCTCGCCCTTCGGCGGCGGCAATGTTGCTGGTAACGCACCCGTCGAGGAAACCGTCATCAACAACTATTACGGTGACA
GCGCCAACCCGCAGGATAACAACGATGACGATATCCAGCAGGCCGATTACGACGATAGCGCCGACGACATGGATTCCGAT
TCAGGCGACGACGGTTCGTTCGCCTGA

Upstream 100 bases:

>100_bases
GGATCATTACCGAAATTTAAAATTTGGACCGCTTTGAAAAGCCTGAATTGTGGCCTACCTCCTTATCGTGGATTTACGCT
TCACGGTAAGGAGGCAGCAT

Downstream 100 bases:

>100_bases
GCCTGCAATCGCCTGAAAAGCCGGATCAGCCGCGACCCCGATACGGTGCAACGCCCTGATCCGGCAGCCATACGCCTTCG
GGGGCGGCTCCCGTCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: yba2 [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSA
PQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGT
AAGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD
SGDDGSFA

Sequences:

>Translated_248_residues
MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSA
PQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGT
AAGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD
SGDDGSFA
>Mature_247_residues
SPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSAP
QAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTA
AGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSDS
GDDGSFA

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018648 [H]

Pfam domain/function: PF09849 DUF2076 [H]

EC number: NA

Molecular weight: Translated: 25010; Mature: 24879

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAA
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH
AAHIKQLEDRIHALESGGSAPQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTA
HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTAAGVAGGMLLANSLSGIFGS
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
SGDDGSFA
CCCCCCCC
>Mature Secondary Structure 
SPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAA
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH
AAHIKQLEDRIHALESGGSAPQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTA
HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTAAGVAGGMLLANSLSGIFGS
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
SGDDGSFA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]