Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185134
Identifier: 159185134
GI number: 159185134
Start: 2244578
End: 2245324
Strand: Direct
Name: 159185134
Synonym: Atu2272
Alternate gene names: NA
Gene position: 2244578-2245324 (Clockwise)
Preceding gene: 159185133
Following gene: 15889552
Centisome position: 78.99
GC content: 65.06
Gene sequence:
>747_bases ATGTCACCGGAAGAAAGCCAGCTTCTCAAGGGGCTGTTCGACAGGACCAAAACCGCATCCGCCACCCCGCGTGACCGCGA GGCGGAAACATTGATCGCAGACGCCGTGCGCGATCAGCCCGCAGCTCCCTATTATCTCGCCCAGGCGGTGATCGTTCAGG AAAAGGGTCTGGAAGCGGCAGCCGCCCATATCAAACAGCTCGAAGACCGCATCCATGCGCTGGAAAGCGGTGGCAGCGCC CCGCAGGCGGCGGCGCAGGGCGGTTTCCTCAGTTCCATCTTCGGCACCGGCCAGCCGCAGCCGCCCGCACCTGCACCAGC CCCGGCGGCTGCACCAGGCTCCTGGCGTAACGATACCGCCGGCCAGACTGCCGGCCCTTGGGGCGCACCTGCCGCTCAGC AATCAGCCGGGCCCTGGAGCCAGCAACCCGCCGCCGTCGGACGTTCGGGTGGCGGCTTTTTGCAGGGCGCGCTCGGCACC GCCGCAGGTGTCGCCGGCGGCATGCTGCTTGCCAATTCGCTGAGCGGCATTTTCGGCAGCCACATGTCGTCGCTTGGCCT TGGCTCGCCCTTCGGCGGCGGCAATGTTGCTGGTAACGCACCCGTCGAGGAAACCGTCATCAACAACTATTACGGTGACA GCGCCAACCCGCAGGATAACAACGATGACGATATCCAGCAGGCCGATTACGACGATAGCGCCGACGACATGGATTCCGAT TCAGGCGACGACGGTTCGTTCGCCTGA
Upstream 100 bases:
>100_bases GGATCATTACCGAAATTTAAAATTTGGACCGCTTTGAAAAGCCTGAATTGTGGCCTACCTCCTTATCGTGGATTTACGCT TCACGGTAAGGAGGCAGCAT
Downstream 100 bases:
>100_bases GCCTGCAATCGCCTGAAAAGCCGGATCAGCCGCGACCCCGATACGGTGCAACGCCCTGATCCGGCAGCCATACGCCTTCG GGGGCGGCTCCCGTCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: yba2 [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSA PQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGT AAGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD SGDDGSFA
Sequences:
>Translated_248_residues MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSA PQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGT AAGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD SGDDGSFA >Mature_247_residues SPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAAAAHIKQLEDRIHALESGGSAP QAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTAGQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTA AGVAGGMLLANSLSGIFGSHMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSDS GDDGSFA
Specific function: Unknown
COG id: COG3416
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018648 [H]
Pfam domain/function: PF09849 DUF2076 [H]
EC number: NA
Molecular weight: Translated: 25010; Mature: 24879
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAA CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH AAHIKQLEDRIHALESGGSAPQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTA HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTAAGVAGGMLLANSLSGIFGS CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC SGDDGSFA CCCCCCCC >Mature Secondary Structure SPEESQLLKGLFDRTKTASATPRDREAETLIADAVRDQPAAPYYLAQAVIVQEKGLEAA CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH AAHIKQLEDRIHALESGGSAPQAAAQGGFLSSIFGTGQPQPPAPAPAPAAAPGSWRNDTA HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GQTAGPWGAPAAQQSAGPWSQQPAAVGRSGGGFLQGALGTAAGVAGGMLLANSLSGIFGS CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSSLGLGSPFGGGNVAGNAPVEETVINNYYGDSANPQDNNDDDIQQADYDDSADDMDSD HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC SGDDGSFA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]