Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185122
Identifier: 159185122
GI number: 159185122
Start: 2221017
End: 2221283
Strand: Direct
Name: 159185122
Synonym: Atu2248
Alternate gene names: NA
Gene position: 2221017-2221283 (Clockwise)
Preceding gene: 15889523
Following gene: 15889525
Centisome position: 78.16
GC content: 53.93
Gene sequence:
>267_bases ATGATTACTTCAAACAGCATGCCTATTTCCGCTTCCCCCGAGGGAGCATCGCAATCCATCGATACCCCCGAATTGATTGA CCGCCTGGCCGCGGAAATGCGTGCTACGGGTGATCGCGAACTGCCGCATTCCTTTTATGTCGAACAGGTAAAACGCACGC TGGCCGGAAAGACGGTGAAGCGCGCCGATAATGACGAAATGCCTCGTACAAAAATCCCGGCAGCTGGAACTTCCTCTGTT TTCCAGTGCTGGGCAATGCCCGAATAG
Upstream 100 bases:
>100_bases CTTATCAGCCATTTGGTCGCAAATAGCGCAAATTAGGACTTATGGAAAAATCAAGGCAGTGGTAGTCTCCTCCCGCAGAC GTACTGGAGGAGCTATCGTC
Downstream 100 bases:
>100_bases GGGCCTGAACAGGGCGGACGCCACTCTGGAACATAAGCGGCGAACGTTCGTTTCTTGTCGGAGGGACAGCATCACATCAA TGCTGTCCCTCACTTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MITSNSMPISASPEGASQSIDTPELIDRLAAEMRATGDRELPHSFYVEQVKRTLAGKTVKRADNDEMPRTKIPAAGTSSV FQCWAMPE
Sequences:
>Translated_88_residues MITSNSMPISASPEGASQSIDTPELIDRLAAEMRATGDRELPHSFYVEQVKRTLAGKTVKRADNDEMPRTKIPAAGTSSV FQCWAMPE >Mature_88_residues MITSNSMPISASPEGASQSIDTPELIDRLAAEMRATGDRELPHSFYVEQVKRTLAGKTVKRADNDEMPRTKIPAAGTSSV FQCWAMPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9625; Mature: 9625
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSNSMPISASPEGASQSIDTPELIDRLAAEMRATGDRELPHSFYVEQVKRTLAGKTVK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RADNDEMPRTKIPAAGTSSVFQCWAMPE CCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MITSNSMPISASPEGASQSIDTPELIDRLAAEMRATGDRELPHSFYVEQVKRTLAGKTVK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RADNDEMPRTKIPAAGTSSVFQCWAMPE CCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA