Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yjbB [H]

Identifier: 159185120

GI number: 159185120

Start: 2217869

End: 2219521

Strand: Direct

Name: yjbB [H]

Synonym: Atu2245

Alternate gene names: 159185120

Gene position: 2217869-2219521 (Clockwise)

Preceding gene: 15889520

Following gene: 15889523

Centisome position: 78.05

GC content: 60.98

Gene sequence:

>1653_bases
ATGCAATCCACAATTGTCATCGTCAACCTTCTCGGCGCCGTTGCGCTGCTGCTCTTCGGCCTTGCCCAGGTGAAGGATGG
CGTCACCCGTGCCTTCGGCATGAAACTGCGAAGCGTGCTCGCTACCGGCACCCAGAACGGCCCGCGCTCGTTCTTTTCCG
GCTTCTTCGCCACCGTCGCCCTGCAAAGCTCGACGGCGACGGCGCTGACCGTCGCCTCCTTCGCCGAACGGGACCTCATC
AAGCCGCGCATGGCGCAGGTGGTGCTGCTTGGCGCCAATGTCGGCACCGCCGTTACCGCCTGGATTGTTGCGGCCGGCGT
CGAATGGCTCTCGCCGCTGCTGATCCTTGCCGGCATTATCCTGAAAAAAGGCAGTTCCAATGCCAGACAGGGTGGCGGAA
CCGCCGTCATCGGCATCGGCCTGATGCTTCTGTCGCTGCATCTTCTGAGCGGCGCCACCGAACCGATGCGCGCTTCGCCA
GCGCTAGGCGTCTTCATCGGCCTGCTGGATGGCGCATGGCCTGTCGCGCTGATCTTTTCCGCCGTGCTCGCCTTCGTCTC
CTCCTCCAGCCTTGCCGTCGTGGTGCTCATCCTGTCGCTGACAGCCACTGGCACCTTGTCTACCGGCCTCATCATCGTTC
TCATTCTCGGCGCCAATCTTGGCGGTGCCATTCCGCCCGTCATCGCCACGCTCTCCGGTCCGGCATCGGCGCGTCGCATC
ACCATCGGCAATCTCGTCGTGCGCACCATCGGCTGCCTGATTGCCATGCCGCTCGCCTCCTATGGCGCAACGTATTTGCA
GCAATTGCCGCTTTCGCCCGCCAAACTGCCTGTTGATGCGCATCTCATCTTCAACCTCATTCTGGCGACACTCGCCTGGC
CCTTCTCCGGCCTGATATCCGATTTGATGGCTAAGCTGGTGCCCGGCGATCCGAAAGCAGAAGACGGCCCGAATTTCCTC
GACCAGCAGGCGCTGGACGTGCCGGTCGTGGCGCTTGCCAATGCCACCCGCGAAGTCCTCAGCGTCGGCGACAGCATCGA
GCGGATGCTGATCCGCGCCGAAAACGCCTTCAAGCACAATGATCTGGCGCCGCTTCAGGAAGTGGCCCTGCTCGAAAAGA
AGGTCGACCGCCGCCAGCAGGAGGTGAAGGTCTATCTTTCGCAACTGGGCCGCAAGGGACTGACCGACGAGGAAGCGCGC
CGTTCGATCGCCATCATCGATTATGCGATCAATCTCGAACATATCGGCGATATCATCGAAAAGGGCATTTGCGAGCAGAT
CCGCAAGAAGGTGCTGAACAGCTTCAAATTTTCCGACGACGGCTATGAGGAGCTGAAAACCCTGTTCGACATGACCATCG
AGAACCTGCGTGCTGCCCAGAGCATTCTGGTAACAGGCGATTTCGAGCTTGCCCGCCGGTTGATGGAAAGCAAGGTGGAT
ATACGCCGCCTCGAAAAACAGTCCTCCAACCGCCATCTGGAGCGGCTGCGTGACGGGCTGGCGGAAAGCATGCAGACCAG
TTCGCTGCATCTAGACATGCTGCGCGACCTGAAGCGCATCAACGCCCATATCGTGACGGTGGCACATCCCATTCTGGATG
AAAGCGGCGTGCTGATCGAAAGCCGCCTGCGTTACGCCGAACCGCGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCCTGTACGGTGAGCATTCACGCTCCTATACTGATTAGCCGGACAATAAAAATCGCTCTCGCCGGGACCGTGCGCCGG
CGGGTGTGAGGAGACGTCGC

Downstream 100 bases:

>100_bases
GCATTTCGAGGAAAAGCGGCCCTGGTTTTCCGTCCGGAAACACACGAACGCTCTAAAACTCAATCGGCCGAGGGCAGCCG
CCGCATGGTGAATTCGATGC

Product: Na+/Pi-cotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MQSTIVIVNLLGAVALLLFGLAQVKDGVTRAFGMKLRSVLATGTQNGPRSFFSGFFATVALQSSTATALTVASFAERDLI
KPRMAQVVLLGANVGTAVTAWIVAAGVEWLSPLLILAGIILKKGSSNARQGGGTAVIGIGLMLLSLHLLSGATEPMRASP
ALGVFIGLLDGAWPVALIFSAVLAFVSSSSLAVVVLILSLTATGTLSTGLIIVLILGANLGGAIPPVIATLSGPASARRI
TIGNLVVRTIGCLIAMPLASYGATYLQQLPLSPAKLPVDAHLIFNLILATLAWPFSGLISDLMAKLVPGDPKAEDGPNFL
DQQALDVPVVALANATREVLSVGDSIERMLIRAENAFKHNDLAPLQEVALLEKKVDRRQQEVKVYLSQLGRKGLTDEEAR
RSIAIIDYAINLEHIGDIIEKGICEQIRKKVLNSFKFSDDGYEELKTLFDMTIENLRAAQSILVTGDFELARRLMESKVD
IRRLEKQSSNRHLERLRDGLAESMQTSSLHLDMLRDLKRINAHIVTVAHPILDESGVLIESRLRYAEPRA

Sequences:

>Translated_550_residues
MQSTIVIVNLLGAVALLLFGLAQVKDGVTRAFGMKLRSVLATGTQNGPRSFFSGFFATVALQSSTATALTVASFAERDLI
KPRMAQVVLLGANVGTAVTAWIVAAGVEWLSPLLILAGIILKKGSSNARQGGGTAVIGIGLMLLSLHLLSGATEPMRASP
ALGVFIGLLDGAWPVALIFSAVLAFVSSSSLAVVVLILSLTATGTLSTGLIIVLILGANLGGAIPPVIATLSGPASARRI
TIGNLVVRTIGCLIAMPLASYGATYLQQLPLSPAKLPVDAHLIFNLILATLAWPFSGLISDLMAKLVPGDPKAEDGPNFL
DQQALDVPVVALANATREVLSVGDSIERMLIRAENAFKHNDLAPLQEVALLEKKVDRRQQEVKVYLSQLGRKGLTDEEAR
RSIAIIDYAINLEHIGDIIEKGICEQIRKKVLNSFKFSDDGYEELKTLFDMTIENLRAAQSILVTGDFELARRLMESKVD
IRRLEKQSSNRHLERLRDGLAESMQTSSLHLDMLRDLKRINAHIVTVAHPILDESGVLIESRLRYAEPRA
>Mature_550_residues
MQSTIVIVNLLGAVALLLFGLAQVKDGVTRAFGMKLRSVLATGTQNGPRSFFSGFFATVALQSSTATALTVASFAERDLI
KPRMAQVVLLGANVGTAVTAWIVAAGVEWLSPLLILAGIILKKGSSNARQGGGTAVIGIGLMLLSLHLLSGATEPMRASP
ALGVFIGLLDGAWPVALIFSAVLAFVSSSSLAVVVLILSLTATGTLSTGLIIVLILGANLGGAIPPVIATLSGPASARRI
TIGNLVVRTIGCLIAMPLASYGATYLQQLPLSPAKLPVDAHLIFNLILATLAWPFSGLISDLMAKLVPGDPKAEDGPNFL
DQQALDVPVVALANATREVLSVGDSIERMLIRAENAFKHNDLAPLQEVALLEKKVDRRQQEVKVYLSQLGRKGLTDEEAR
RSIAIIDYAINLEHIGDIIEKGICEQIRKKVLNSFKFSDDGYEELKTLFDMTIENLRAAQSILVTGDFELARRLMESKVD
IRRLEKQSSNRHLERLRDGLAESMQTSSLHLDMLRDLKRINAHIVTVAHPILDESGVLIESRLRYAEPRA

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=533, Percent_Identity=35.6472795497186, Blast_Score=297, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 58975; Mature: 58975

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTIVIVNLLGAVALLLFGLAQVKDGVTRAFGMKLRSVLATGTQNGPRSFFSGFFATVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LQSSTATALTVASFAERDLIKPRMAQVVLLGANVGTAVTAWIVAAGVEWLSPLLILAGII
HCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKGSSNARQGGGTAVIGIGLMLLSLHLLSGATEPMRASPALGVFIGLLDGAWPVALIFS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AVLAFVSSSSLAVVVLILSLTATGTLSTGLIIVLILGANLGGAIPPVIATLSGPASARRI
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEE
TIGNLVVRTIGCLIAMPLASYGATYLQQLPLSPAKLPVDAHLIFNLILATLAWPFSGLIS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLMAKLVPGDPKAEDGPNFLDQQALDVPVVALANATREVLSVGDSIERMLIRAENAFKHN
HHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLAPLQEVALLEKKVDRRQQEVKVYLSQLGRKGLTDEEARRSIAIIDYAINLEHIGDIIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEEHHHHHHHHHHHH
KGICEQIRKKVLNSFKFSDDGYEELKTLFDMTIENLRAAQSILVTGDFELARRLMESKVD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH
IRRLEKQSSNRHLERLRDGLAESMQTSSLHLDMLRDLKRINAHIVTVAHPILDESGVLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHH
SRLRYAEPRA
HHHHHCCCCC
>Mature Secondary Structure
MQSTIVIVNLLGAVALLLFGLAQVKDGVTRAFGMKLRSVLATGTQNGPRSFFSGFFATVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LQSSTATALTVASFAERDLIKPRMAQVVLLGANVGTAVTAWIVAAGVEWLSPLLILAGII
HCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKGSSNARQGGGTAVIGIGLMLLSLHLLSGATEPMRASPALGVFIGLLDGAWPVALIFS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AVLAFVSSSSLAVVVLILSLTATGTLSTGLIIVLILGANLGGAIPPVIATLSGPASARRI
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEE
TIGNLVVRTIGCLIAMPLASYGATYLQQLPLSPAKLPVDAHLIFNLILATLAWPFSGLIS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLMAKLVPGDPKAEDGPNFLDQQALDVPVVALANATREVLSVGDSIERMLIRAENAFKHN
HHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLAPLQEVALLEKKVDRRQQEVKVYLSQLGRKGLTDEEARRSIAIIDYAINLEHIGDIIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEEHHHHHHHHHHHH
KGICEQIRKKVLNSFKFSDDGYEELKTLFDMTIENLRAAQSILVTGDFELARRLMESKVD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH
IRRLEKQSSNRHLERLRDGLAESMQTSSLHLDMLRDLKRINAHIVTVAHPILDESGVLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHH
SRLRYAEPRA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]