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The map label for this gene is ydeM [H]

Identifier: 159185113

GI number: 159185113

Start: 2206040

End: 2206513

Strand: Direct

Name: ydeM [H]

Synonym: Atu2234

Alternate gene names: 159185113

Gene position: 2206040-2206513 (Clockwise)

Preceding gene: 159185112

Following gene: 15889511

Centisome position: 77.63

GC content: 59.92

Gene sequence:

>474_bases
ATGGTGCCGGTCGCGACATACACCTATGAGGATTTTGCCGTAGGGCGGGAATTTCCCCTTGGACCACAATCGATTTCCGC
AGCGCAGATCATCGAATTTGCCAGCGAGTTCGACCCCCAGCCCATGCATCTGTCGGAAGAGGCTGGCCGCCGGAGCATTC
TTGGCGGGCTGGCGGCTTCCGGCTGGCACACCTGCAGCCTGCTGATGCGGATGATGGCAGACAGCTACATCTCCAACTCC
ACCTCGCAGGGCAGCCCCGGCATCGATTATGTCGACTGGAAAAAGCCGGTTCTGGCCGGAGACACGCTTTCGGGAAAATC
CATCGTGCTGGAACAGCGCCCTTCCGCGTCGCGCCCCGGCATCGGCCTCGTAAAATTGCGCCACGAGCTTTATAACCAGC
GCGGCATTCTGGTCTCACAGGGAGAAAACACCGTCATGTTCCTGATGGGTGGCGATGGAGGCGTTGCGGCATGA

Upstream 100 bases:

>100_bases
AGCATTATCAGTCAACAGCCGCACCTTCAATTTGACCTTTACGTAAAAGGAAAAATCCTCTTAGATGCGCACAACACTGA
CTGTGCGAAGGGAGGAAACC

Downstream 100 bases:

>100_bases
GACTGGCAGAACTTTCCCCGATCGGCGAACGCGTCACCCTCGATACGCTGCATTTTTCCGCCGAAGACATTATTCGCTTC
GCTCGCGATTTCGACCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVPVATYTYEDFAVGREFPLGPQSISAAQIIEFASEFDPQPMHLSEEAGRRSILGGLAASGWHTCSLLMRMMADSYISNS
TSQGSPGIDYVDWKKPVLAGDTLSGKSIVLEQRPSASRPGIGLVKLRHELYNQRGILVSQGENTVMFLMGGDGGVAA

Sequences:

>Translated_157_residues
MVPVATYTYEDFAVGREFPLGPQSISAAQIIEFASEFDPQPMHLSEEAGRRSILGGLAASGWHTCSLLMRMMADSYISNS
TSQGSPGIDYVDWKKPVLAGDTLSGKSIVLEQRPSASRPGIGLVKLRHELYNQRGILVSQGENTVMFLMGGDGGVAA
>Mature_157_residues
MVPVATYTYEDFAVGREFPLGPQSISAAQIIEFASEFDPQPMHLSEEAGRRSILGGLAASGWHTCSLLMRMMADSYISNS
TSQGSPGIDYVDWKKPVLAGDTLSGKSIVLEQRPSASRPGIGLVKLRHELYNQRGILVSQGENTVMFLMGGDGGVAA

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16850; Mature: 16850

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPVATYTYEDFAVGREFPLGPQSISAAQIIEFASEFDPQPMHLSEEAGRRSILGGLAAS
CCCCEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCC
GWHTCSLLMRMMADSYISNSTSQGSPGIDYVDWKKPVLAGDTLSGKSIVLEQRPSASRPG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCC
IGLVKLRHELYNQRGILVSQGENTVMFLMGGDGGVAA
CHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVPVATYTYEDFAVGREFPLGPQSISAAQIIEFASEFDPQPMHLSEEAGRRSILGGLAAS
CCCCEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCC
GWHTCSLLMRMMADSYISNSTSQGSPGIDYVDWKKPVLAGDTLSGKSIVLEQRPSASRPG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCC
IGLVKLRHELYNQRGILVSQGENTVMFLMGGDGGVAA
CHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]