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The map label for this gene is ydeR [H]

Identifier: 159185066

GI number: 159185066

Start: 2099611

End: 2100819

Strand: Reverse

Name: ydeR [H]

Synonym: Atu2134

Alternate gene names: 159185066

Gene position: 2100819-2099611 (Counterclockwise)

Preceding gene: 159185067

Following gene: 15889413

Centisome position: 73.93

GC content: 62.7

Gene sequence:

>1209_bases
ATGATGACAACGCGTGTAATTGATGGGGATGATGTTGAAGCGACATCCATTTCCCCGGCTCTGACGTTTTTGCTGGCAAC
AGCCTGCGGGCTGATTGCAGCCAATCTTTATTATGGCCAGCCGCTTGCCGGCATCATCGGGACGGAACTCGGTCTTTCCG
CCGGCGCCACTGGCCTGATCGTGACGCTGACGCAGATCGGTTATGGTATCGGCCTGCTGTTCGTCGTGCCGCTCGGTGAT
CTCGTCGAAAACCGCAAGCTGGTGGTCAGTTCGGTCTCGATGGCGGTGTTGTCGCTCGTCGCTGCTGCGTTTGCGCCGCA
TGCGGCGCCGTTCCTGATCGCCGCCTTCCTGGTTGGCGTCAGTTCCGTGGCGGTACAGGTCATCGTTCCCTATGCTGCGC
ATATGGCGCCGCACGCCATTCGGGGGCGCGTGGTCGGCAATGTCATGAGCGGGCTGATGGCCGGCATCATGCTGGCGCGG
CCGGTCTCCAGCCTGCTATCGGAGGTGGTTTCCTGGCGTGGCGTCTTTCTGACGTCCGCAGCGGTCATGGCGCTTCTTGC
CGTGGTGCTTTTCCGACTTCTGCCCGTTCGTATGCCCGAAGCGCGGCTGAGCTACGGCGCGTTGATGGCCTCGATGGGCA
GGCTTGCCTTGCATACTCCGATCCTGCGGCGGCGGGCGATCTACCACGCTTTCCTCTTTGCCGCCTTCAGCCTGTTCTGG
ACGACGACGCCGCTTTATCTGAGCGGGCCGCATTTCAATCTCAGCCAGGGTGAGATCGCGCTCTTCGCACTGGCGGGCGC
GGCCGGCACCGTGGCCGCACCAATTGCCGGGCGGATGGCCGATCGTGGCTGGACCCGTGTGGCCACGCTCTTTGCGCTGG
TGTCGGTGGCGCTCTCTTTCGCCGTCACGCATCTGGCGCCCGAAGGTTCGCATCTGGCGCTCGCCATTCTGGTCGTCGCG
GCAATCGTTCTGGATTTCGGCGTCACCACCAATCTGGTACTCGGCCAACGAGCGATCTTCACGCTTGGGGCGGAATTCCG
CAGCCGCCTGAACGGTATTTACATGGCGACGTTTTTCATGGGCGGTGCGATCGGTTCCGCCGTGGGTGGCTGGGCCTATG
CGGTTGGCGAATGGCCAGCCGCCTCGTGGATCGGTTTCGCCTTGCCGGTAGCGGCGCTCCTGTATTTCCTGACGGAAAAG
CGCGCATAA

Upstream 100 bases:

>100_bases
CGCACCCTGAAAGACATGGTGGCCGTGGTGGATATCGCCATGAAGCTTGCTGATTGATTTTGTGACTATTTAGGAAACAT
TTGTTTCCATATTGGAGAAA

Downstream 100 bases:

>100_bases
AGCCCCACAAATGAAAAAGCCCGGCGGACCATAATCCGCCGGGCTTTCTTTTTTTCTTGCCGTCGCTTTATTCGGCGAAT
TCGACCACAACGCCGGGGCG

Product: MFS permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MMTTRVIDGDDVEATSISPALTFLLATACGLIAANLYYGQPLAGIIGTELGLSAGATGLIVTLTQIGYGIGLLFVVPLGD
LVENRKLVVSSVSMAVLSLVAAAFAPHAAPFLIAAFLVGVSSVAVQVIVPYAAHMAPHAIRGRVVGNVMSGLMAGIMLAR
PVSSLLSEVVSWRGVFLTSAAVMALLAVVLFRLLPVRMPEARLSYGALMASMGRLALHTPILRRRAIYHAFLFAAFSLFW
TTTPLYLSGPHFNLSQGEIALFALAGAAGTVAAPIAGRMADRGWTRVATLFALVSVALSFAVTHLAPEGSHLALAILVVA
AIVLDFGVTTNLVLGQRAIFTLGAEFRSRLNGIYMATFFMGGAIGSAVGGWAYAVGEWPAASWIGFALPVAALLYFLTEK
RA

Sequences:

>Translated_402_residues
MMTTRVIDGDDVEATSISPALTFLLATACGLIAANLYYGQPLAGIIGTELGLSAGATGLIVTLTQIGYGIGLLFVVPLGD
LVENRKLVVSSVSMAVLSLVAAAFAPHAAPFLIAAFLVGVSSVAVQVIVPYAAHMAPHAIRGRVVGNVMSGLMAGIMLAR
PVSSLLSEVVSWRGVFLTSAAVMALLAVVLFRLLPVRMPEARLSYGALMASMGRLALHTPILRRRAIYHAFLFAAFSLFW
TTTPLYLSGPHFNLSQGEIALFALAGAAGTVAAPIAGRMADRGWTRVATLFALVSVALSFAVTHLAPEGSHLALAILVVA
AIVLDFGVTTNLVLGQRAIFTLGAEFRSRLNGIYMATFFMGGAIGSAVGGWAYAVGEWPAASWIGFALPVAALLYFLTEK
RA
>Mature_402_residues
MMTTRVIDGDDVEATSISPALTFLLATACGLIAANLYYGQPLAGIIGTELGLSAGATGLIVTLTQIGYGIGLLFVVPLGD
LVENRKLVVSSVSMAVLSLVAAAFAPHAAPFLIAAFLVGVSSVAVQVIVPYAAHMAPHAIRGRVVGNVMSGLMAGIMLAR
PVSSLLSEVVSWRGVFLTSAAVMALLAVVLFRLLPVRMPEARLSYGALMASMGRLALHTPILRRRAIYHAFLFAAFSLFW
TTTPLYLSGPHFNLSQGEIALFALAGAAGTVAAPIAGRMADRGWTRVATLFALVSVALSFAVTHLAPEGSHLALAILVVA
AIVLDFGVTTNLVLGQRAIFTLGAEFRSRLNGIYMATFFMGGAIGSAVGGWAYAVGEWPAASWIGFALPVAALLYFLTEK
RA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41975; Mature: 41975

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]