Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ilvI [H]
Identifier: 159185021
GI number: 159185021
Start: 1994007
End: 1995800
Strand: Reverse
Name: ilvI [H]
Synonym: Atu2036
Alternate gene names: 159185021
Gene position: 1995800-1994007 (Counterclockwise)
Preceding gene: 159185023
Following gene: 15889323
Centisome position: 70.24
GC content: 58.08
Gene sequence:
>1794_bases ATGACGGATAAGGACAATACGGAAAACAGCAATCGCATGACAGGTGCGGAGATCGTTCTGCAGGCGCTGAAGGACAACGG CGTCGAGCACATCTTCGGTTATCCCGGCGGTGCCGTTCTTCCGATTTATGACGAGATTTTCCAGCAGGAAGACATTCAGC ACATCCTCGTGCGTCATGAGCAGGGTGCCGGCCACGCGGCCGAAGGGTATGCCCGTTCCACCGGCAAGGTCGGCGTCATG CTCGTTACCTCCGGTCCCGGCGCCACCAATGCGGTGACGCCGCTGCAGGATGCGCTGATGGATTCCATTCCGCTCGTCTG CCTGTCCGGCCAGGTTCCGACATCGCTGATCGGTTCCGACGCATTTCAGGAATGCGATACCGTCGGCATCACGCGCCCCT GCACCAAGCACAACTGGCTGGTCAAGGACGTCAACGAACTGGCTGGCATCATCCATGAAGCCTTCCGCATCGCGCAGACT GGCCGTCCGGGTCCCGTCGTTGTCGATATTCCGAAGGATATTCAGTTCGCCACCGGCACCTATACGCCGCCTTCCGCCGC CATCCAGCAGAAGAGCTACAAGCCGAAGGTTCAGGGCGACCTCAACGCCATTCATGCTGCCATCGAACTGATGTCGAAAG CGAAGAAGCCGGTTTTTTACACCGGCGGCGGCGTCATCAATTCTGGTCCGGAGGCAACCCGTCTGCTGCGTGAACTGGTC GAGCTCACCAATTTCCCGATCACCTCGACGCTGATGGGTCTCGGCGCCTATCCGGCTTCCGGCAAGAACTGGCTCGGCAT GCTGGGCATGCACGGTTCCTACGAAGCCAATATGACGATGCATGATTGCGATGTCATGGTCTGCATCGGCGCGCGTTTCG ATGACCGTATTACCGGTCGCATCAATGCGTTTTCGCCGAATTCCAAGAAGATCCATATCGATATCGATCCGTCCTCGATC AACAAGACCGTGCGTGTCGACGTGCCTGTTATCGGCGATGTCGGGCATGTTCTGGAAGACATGGTTCGCCTGTGGCGCGC TTTGCCGAAGAAACCGGAAAAAGCGCAGACGGCCGACTGGTGGTCGCAGATTGAGCGCTGGCGCGCCCGCAATTCCTTCG CCTACAAGAACTCCAAAGATGTCATCATGCCGCAATATGCATTGCAGCGGCTTTATGAGGCGTCGAAGGGACGCGACACT TACATCACGACAGAAGTCGGCCAGCACCAGATGTGGGCGGCGCAGTTCTTCGGTTTCGAGGAGCCGAACCACTGGATGAC CTCGGGCGGTCTCGGCACCATGGGTTATGGCCTGCCGGCGGCTATCGGCGTGCAGGTCGCGCATCCCGAAGCGCTTGTCA TCGACATTGCCGGTGACGCATCGATCCAGATGTGTATCCAGGAAATGTCCTGCGCCATCCAGTACGGCCTGCCGGTGAAG ATTTTCATCCTCAACAACCAGTATATGGGCATGGTGCGGCAATGGCAGCAGTTGCTGCACGGCAACCGTCTGTCCAACTC CTATACCGAAGCCATGCCTGATTTCGTCAAGCTGGCGGAGGCCTATGGCGCTGTCGGCATGTATTGCGACGACCCGAAGG AACTGGACGACAAGATCGCCGAGATGATTGCGGTCAACAAGCCGGTCATCTTCGATTGCCGCGTTGCCAATCTCGCCAAT TGCTTCCCGATGATCCCATCTGGTAAAGCCCATAACGAGATGCTGTTGCCGGATGAGGCGACGGATGAAGCTGTTGCCAA CGCCATCGATGCCAAGGGCCGTCAGCTAGTCTGA
Upstream 100 bases:
>100_bases CATGCGCTGAACGAGGCTCCTCTAGGGGCCTTTTTTTATGTCTTCAAACAGGCCCTCGGGCTCCTCGATATCCAAAGCCA AAGCGGGATGGAAACAGGCA
Downstream 100 bases:
>100_bases GCCGGGAGAGGAAAAGGACATGAACGCACACCTACAACCCACCGGCTCCGCCTATTTCATCCAGAAGGAAACGGCTGCCG TTGAAAATCACACGCTGTCG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MTDKDNTENSNRMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHAAEGYARSTGKVGVM LVTSGPGATNAVTPLQDALMDSIPLVCLSGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVKDVNELAGIIHEAFRIAQT GRPGPVVVDIPKDIQFATGTYTPPSAAIQQKSYKPKVQGDLNAIHAAIELMSKAKKPVFYTGGGVINSGPEATRLLRELV ELTNFPITSTLMGLGAYPASGKNWLGMLGMHGSYEANMTMHDCDVMVCIGARFDDRITGRINAFSPNSKKIHIDIDPSSI NKTVRVDVPVIGDVGHVLEDMVRLWRALPKKPEKAQTADWWSQIERWRARNSFAYKNSKDVIMPQYALQRLYEASKGRDT YITTEVGQHQMWAAQFFGFEEPNHWMTSGGLGTMGYGLPAAIGVQVAHPEALVIDIAGDASIQMCIQEMSCAIQYGLPVK IFILNNQYMGMVRQWQQLLHGNRLSNSYTEAMPDFVKLAEAYGAVGMYCDDPKELDDKIAEMIAVNKPVIFDCRVANLAN CFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV
Sequences:
>Translated_597_residues MTDKDNTENSNRMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHAAEGYARSTGKVGVM LVTSGPGATNAVTPLQDALMDSIPLVCLSGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVKDVNELAGIIHEAFRIAQT GRPGPVVVDIPKDIQFATGTYTPPSAAIQQKSYKPKVQGDLNAIHAAIELMSKAKKPVFYTGGGVINSGPEATRLLRELV ELTNFPITSTLMGLGAYPASGKNWLGMLGMHGSYEANMTMHDCDVMVCIGARFDDRITGRINAFSPNSKKIHIDIDPSSI NKTVRVDVPVIGDVGHVLEDMVRLWRALPKKPEKAQTADWWSQIERWRARNSFAYKNSKDVIMPQYALQRLYEASKGRDT YITTEVGQHQMWAAQFFGFEEPNHWMTSGGLGTMGYGLPAAIGVQVAHPEALVIDIAGDASIQMCIQEMSCAIQYGLPVK IFILNNQYMGMVRQWQQLLHGNRLSNSYTEAMPDFVKLAEAYGAVGMYCDDPKELDDKIAEMIAVNKPVIFDCRVANLAN CFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV >Mature_596_residues TDKDNTENSNRMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHAAEGYARSTGKVGVML VTSGPGATNAVTPLQDALMDSIPLVCLSGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVKDVNELAGIIHEAFRIAQTG RPGPVVVDIPKDIQFATGTYTPPSAAIQQKSYKPKVQGDLNAIHAAIELMSKAKKPVFYTGGGVINSGPEATRLLRELVE LTNFPITSTLMGLGAYPASGKNWLGMLGMHGSYEANMTMHDCDVMVCIGARFDDRITGRINAFSPNSKKIHIDIDPSSIN KTVRVDVPVIGDVGHVLEDMVRLWRALPKKPEKAQTADWWSQIERWRARNSFAYKNSKDVIMPQYALQRLYEASKGRDTY ITTEVGQHQMWAAQFFGFEEPNHWMTSGGLGTMGYGLPAAIGVQVAHPEALVIDIAGDASIQMCIQEMSCAIQYGLPVKI FILNNQYMGMVRQWQQLLHGNRLSNSYTEAMPDFVKLAEAYGAVGMYCDDPKELDDKIAEMIAVNKPVIFDCRVANLANC FPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=580, Percent_Identity=26.551724137931, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI21361361, Length=567, Percent_Identity=23.9858906525573, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI87081685, Length=569, Percent_Identity=50.7908611599297, Blast_Score=590, Evalue=1e-170, Organism=Escherichia coli, GI1790104, Length=580, Percent_Identity=40.8620689655172, Blast_Score=440, Evalue=1e-124, Organism=Escherichia coli, GI1786717, Length=571, Percent_Identity=31.8739054290718, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI1787096, Length=553, Percent_Identity=26.9439421338156, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI1788716, Length=558, Percent_Identity=25.4480286738351, Blast_Score=145, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17531301, Length=543, Percent_Identity=27.4401473296501, Blast_Score=152, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17531299, Length=543, Percent_Identity=27.4401473296501, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17542570, Length=537, Percent_Identity=24.2085661080074, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323755, Length=582, Percent_Identity=45.360824742268, Blast_Score=512, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6320816, Length=497, Percent_Identity=24.5472837022133, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI19922626, Length=559, Percent_Identity=25.2236135957066, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65398; Mature: 65266
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKDNTENSNRMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHE CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCC QGAGHAAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCLSGQVPTSLIGSD CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCH AFQECDTVGITRPCTKHNWLVKDVNELAGIIHEAFRIAQTGRPGPVVVDIPKDIQFATGT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCC YTPPSAAIQQKSYKPKVQGDLNAIHAAIELMSKAKKPVFYTGGGVINSGPEATRLLRELV CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHH ELTNFPITSTLMGLGAYPASGKNWLGMLGMHGSYEANMTMHDCDVMVCIGARFDDRITGR HHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEEECCCCCCCEECE INAFSPNSKKIHIDIDPSSINKTVRVDVPVIGDVGHVLEDMVRLWRALPKKPEKAQTADW EEEECCCCCEEEEEECHHHCCCEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH WSQIERWRARNSFAYKNSKDVIMPQYALQRLYEASKGRDTYITTEVGQHQMWAAQFFGFE HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC EPNHWMTSGGLGTMGYGLPAAIGVQVAHPEALVIDIAGDASIQMCIQEMSCAIQYGLPVK CCCCEEECCCCCCCCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCEE IFILNNQYMGMVRQWQQLLHGNRLSNSYTEAMPDFVKLAEAYGAVGMYCDDPKELDDKIA EEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH EMIAVNKPVIFDCRVANLANCFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV HHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDKDNTENSNRMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHE CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCC QGAGHAAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCLSGQVPTSLIGSD CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCH AFQECDTVGITRPCTKHNWLVKDVNELAGIIHEAFRIAQTGRPGPVVVDIPKDIQFATGT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCC YTPPSAAIQQKSYKPKVQGDLNAIHAAIELMSKAKKPVFYTGGGVINSGPEATRLLRELV CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHH ELTNFPITSTLMGLGAYPASGKNWLGMLGMHGSYEANMTMHDCDVMVCIGARFDDRITGR HHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEEECCCCCCCEECE INAFSPNSKKIHIDIDPSSINKTVRVDVPVIGDVGHVLEDMVRLWRALPKKPEKAQTADW EEEECCCCCEEEEEECHHHCCCEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH WSQIERWRARNSFAYKNSKDVIMPQYALQRLYEASKGRDTYITTEVGQHQMWAAQFFGFE HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC EPNHWMTSGGLGTMGYGLPAAIGVQVAHPEALVIDIAGDASIQMCIQEMSCAIQYGLPVK CCCCEEECCCCCCCCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCEE IFILNNQYMGMVRQWQQLLHGNRLSNSYTEAMPDFVKLAEAYGAVGMYCDDPKELDDKIA EEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH EMIAVNKPVIFDCRVANLANCFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV HHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]