Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185017
Identifier: 159185017
GI number: 159185017
Start: 1989524
End: 1989904
Strand: Direct
Name: 159185017
Synonym: Atu2029
Alternate gene names: NA
Gene position: 1989524-1989904 (Clockwise)
Preceding gene: 15889313
Following gene: 159185018
Centisome position: 70.01
GC content: 55.91
Gene sequence:
>381_bases ATGTCCATGAAAATCCGCTTTATCGTTCCCGCCCTCGTTCTGGCTTTTGCCGGAACGGCCTATGCAGCGCCGGCGGTCGA AACGGTCAAAACCGACAAAGGCAATGTGCTTGCCGGCGAAAAAGGCATGACGCTCTACACTTTCAAGAACGACAAGAAGG GCGTATCCAATTGTTACGACAAATGCGCGGTGAACTGGCCGCCGTTTTTTGCAGCCGCCAGTGACAAGGCCGAGGGCGCC TATTCCCTCTTGAAGCGCAAGGACGGCAAGATGCAGTGGGCAAAGGACGGCATGCCGCTTTATTACTGGGTCAAGGACAC GAAAAAGGGCGACGCCACCGGCGACGGTATGAACGGTGTATGGGATGCCGCAAAACCCTGA
Upstream 100 bases:
>100_bases TGGATAAGTTTAAAAAATATTTCGCAACGGGGAATAAACCGGCGCGCGACGGTGTCTCTTGATGCGCTGGCGGCTTGAGC CCGCCCGAACCAAGGAGGAT
Downstream 100 bases:
>100_bases TGGCATGAATGGTGAAAAGCGGGGGAGCCACTCCCCCGCAACCGGCAGCTTCGAAACGGAGATGCTGGCGTTGATACCCA TGCTGCGCCGTTATTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSMKIRFIVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKGVSNCYDKCAVNWPPFFAAASDKAEGA YSLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATGDGMNGVWDAAKP
Sequences:
>Translated_126_residues MSMKIRFIVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKGVSNCYDKCAVNWPPFFAAASDKAEGA YSLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATGDGMNGVWDAAKP >Mature_125_residues SMKIRFIVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKGVSNCYDKCAVNWPPFFAAASDKAEGAY SLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATGDGMNGVWDAAKP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13713; Mature: 13582
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKIRFIVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKGVSNCYD CCEEEHHHHHHHHHHHCCCCCCCCCHHEEECCCCCEEECCCCCEEEEEECCCCCHHHHHH KCAVNWPPFFAAASDKAEGAYSLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATGDGMNGV HHCCCCCCCEECCCCCCHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCC WDAAKP CCCCCC >Mature Secondary Structure SMKIRFIVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKGVSNCYD CEEEHHHHHHHHHHHCCCCCCCCCHHEEECCCCCEEECCCCCEEEEEECCCCCHHHHHH KCAVNWPPFFAAASDKAEGAYSLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATGDGMNGV HHCCCCCCCEECCCCCCHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCC WDAAKP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA