Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185010

Identifier: 159185010

GI number: 159185010

Start: 1967456

End: 1967911

Strand: Direct

Name: 159185010

Synonym: Atu2004

Alternate gene names: NA

Gene position: 1967456-1967911 (Clockwise)

Preceding gene: 15889292

Following gene: 15889294

Centisome position: 69.24

GC content: 61.18

Gene sequence:

>456_bases
ATGAAAATCAATGTCATCGCTCTCGCTGCCGCAGCAGCGCTTACCTCTTCCGTGGCCTTTGCCCAGACGGCAACCACGGC
CCCTGCTGCCGGCGCGGATGCCACATTGTCCGGCCCCGGCATCACCATGGGCACCAAGGCCAGCGGCCCGCTGAAATTCG
TCAACGTCCAGAAGACCGATCTCACCGCCTCCCAGCTTGACGGCATGGACATCTATAACGCCCAGAATGAAAACATCGGC
GAGATCGAGGATGTGGTGATTGGCGACGGCAAGTCGGTGATCGGCCTCGTCGCCAGCGTTGGCGGCTTCCTCGGCATCGA
CAAGAGCTATGTGGTGCTCGACCCGGCATCCGTCGCGGTTCACAACGACAACGGCACCTGGAAGGCCTATGTCGACACCA
CCAAGGACGCTCTGCAGAACGCCCCCAAGCTCGACTACGACAAGCTGGACGACTGA

Upstream 100 bases:

>100_bases
ATATAGACCAAATTTTCCTCCCCTCCCATGCGGAACCAAATCCGCCTCCCCCCGTTTTCTCCCCGAACGCAATGTTCAGC
ATACAAAGGGAAGAAACATC

Downstream 100 bases:

>100_bases
TTACCCCTGCGGTTGTTCACTTGTTTCCCCCGCGCCGAGGCGCGGGGGTTTTCGTATGATCATTCCGCGCAGCAACCGGC
TATCCTCGCCCGGCAGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG
EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD

Sequences:

>Translated_151_residues
MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG
EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD
>Mature_151_residues
MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG
EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15458; Mature: 15458

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTD
CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCEEEEEEECCC
LTASQLDGMDIYNAQNENIGEIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAV
CCHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCEEEE
HNDNGTWKAYVDTTKDALQNAPKLDYDKLDD
ECCCCCEEEEEECCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTD
CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCEEEEEEECCC
LTASQLDGMDIYNAQNENIGEIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAV
CCHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCEEEE
HNDNGTWKAYVDTTKDALQNAPKLDYDKLDD
ECCCCCEEEEEECCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA