Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185010
Identifier: 159185010
GI number: 159185010
Start: 1967456
End: 1967911
Strand: Direct
Name: 159185010
Synonym: Atu2004
Alternate gene names: NA
Gene position: 1967456-1967911 (Clockwise)
Preceding gene: 15889292
Following gene: 15889294
Centisome position: 69.24
GC content: 61.18
Gene sequence:
>456_bases ATGAAAATCAATGTCATCGCTCTCGCTGCCGCAGCAGCGCTTACCTCTTCCGTGGCCTTTGCCCAGACGGCAACCACGGC CCCTGCTGCCGGCGCGGATGCCACATTGTCCGGCCCCGGCATCACCATGGGCACCAAGGCCAGCGGCCCGCTGAAATTCG TCAACGTCCAGAAGACCGATCTCACCGCCTCCCAGCTTGACGGCATGGACATCTATAACGCCCAGAATGAAAACATCGGC GAGATCGAGGATGTGGTGATTGGCGACGGCAAGTCGGTGATCGGCCTCGTCGCCAGCGTTGGCGGCTTCCTCGGCATCGA CAAGAGCTATGTGGTGCTCGACCCGGCATCCGTCGCGGTTCACAACGACAACGGCACCTGGAAGGCCTATGTCGACACCA CCAAGGACGCTCTGCAGAACGCCCCCAAGCTCGACTACGACAAGCTGGACGACTGA
Upstream 100 bases:
>100_bases ATATAGACCAAATTTTCCTCCCCTCCCATGCGGAACCAAATCCGCCTCCCCCCGTTTTCTCCCCGAACGCAATGTTCAGC ATACAAAGGGAAGAAACATC
Downstream 100 bases:
>100_bases TTACCCCTGCGGTTGTTCACTTGTTTCCCCCGCGCCGAGGCGCGGGGGTTTTCGTATGATCATTCCGCGCAGCAACCGGC TATCCTCGCCCGGCAGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD
Sequences:
>Translated_151_residues MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD >Mature_151_residues MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTDLTASQLDGMDIYNAQNENIG EIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAVHNDNGTWKAYVDTTKDALQNAPKLDYDKLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15458; Mature: 15458
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTD CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCEEEEEEECCC LTASQLDGMDIYNAQNENIGEIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAV CCHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCEEEE HNDNGTWKAYVDTTKDALQNAPKLDYDKLDD ECCCCCEEEEEECCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKINVIALAAAAALTSSVAFAQTATTAPAAGADATLSGPGITMGTKASGPLKFVNVQKTD CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCEEEEEEECCC LTASQLDGMDIYNAQNENIGEIEDVVIGDGKSVIGLVASVGGFLGIDKSYVVLDPASVAV CCHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCEEEE HNDNGTWKAYVDTTKDALQNAPKLDYDKLDD ECCCCCEEEEEECCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA