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The map label for this gene is xynZ [H]

Identifier: 15889292

GI number: 15889292

Start: 1965887

End: 1966855

Strand: Direct

Name: xynZ [H]

Synonym: Atu2002

Alternate gene names: 15889292

Gene position: 1965887-1966855 (Clockwise)

Preceding gene: 15889291

Following gene: 159185010

Centisome position: 69.18

GC content: 61.2

Gene sequence:

>969_bases
ATGGTTCGAAAAAATCTGGCGGCCCTGTGCCTCTTCCTATCCTGCAACGCAGCGCTTGCCGGGCAGATCGAAGACACTAC
CTTCCACAGCCCAGCCCTGAACGCGCCGCTTCCCGTCAACATCTACCGCCCGGATGGCGCACCGCCCGAAAACGGCTGGC
CGGTGCTTTATCTCCTGCACGGCCATGATGGAGACCAGAACAGCTGGCGCGATCTCGGCAATATCGAAAAGACGCTCGAT
ACGCTCATCGCAGCCGGCGCCATCCGGCCGCTGGTTGTCGTCATGCCCGGTGTCAAGAACAGTTGGTACGTGGATTCCGC
CGCTGTCGGCGGCCCCGGCGATTACGAAACCGCCTTGACCGGCGACCTGCGCCACCAGATCGAAAAAACCCTGCCGGTGC
GCAAGGATCGTCAAGGCCGTGCCATCGCCGGCCTCTCCATGGGCGGTTTCGGCGCATTGCATCTGGCCTATGGCCATGAG
GATCTCTATGGCGCCGTGGCCAGCCTGTCCGGTGCCATCTGGCAGAACGTTCCCGCCTCCGATCTCGACAGGACGCCCGC
CGAACTCAAGCTCATCCAAGACAGCGCCTTTTTCCACCGGGTCGACCGCACCACCGTCACCAGCGGTATCGTGCTGCCTT
CAACCGGCGATCATTTTTCCGGCGCTTTCGGCACGCCATTCGATGCCAGGCTCTTTAATGAAAAGAACGTCTTTACCCTC
GTCGCCCAGCACGTTGCCGAAAGCGAGGATTTGCCTGCCACTTACCTGACCGTCGGCGACGATGACGGCTTCTTCCTCTG
GCGCGGCGCCATCGCCTTGCATGAGACGTTGCAGGCCGACAAGCGCAAATCCGAGTTGCGGGTGACCGATGGTGATCATG
TCTGGTCGGTATGGAAGGTGTCGATCATCGATGCGTTGAAGTTCATCGATGGGGAATGGGACAGGGCAGCGGACGCCGCC
GGTGATTGA

Upstream 100 bases:

>100_bases
GACCGGGCGGCCGGGGCGATAAGCCACTGGCTCCGGCCCCAACTCACCATCGCTGCGACCGTCGCTTGCATTTATAAAAT
GGCCAACAGGGAAACACGGC

Downstream 100 bases:

>100_bases
GGCGCGACCCGCCCTCTCAAACCCGACACACCGTCATTTTCCGATTCGCTTCTTTCCGCTCTTTCCCGCAAGGTTCAACG
CCGCCGCAGCCCGTATCAGC

Product: esterase/lipase

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVRKNLAALCLFLSCNAALAGQIEDTTFHSPALNAPLPVNIYRPDGAPPENGWPVLYLLHGHDGDQNSWRDLGNIEKTLD
TLIAAGAIRPLVVVMPGVKNSWYVDSAAVGGPGDYETALTGDLRHQIEKTLPVRKDRQGRAIAGLSMGGFGALHLAYGHE
DLYGAVASLSGAIWQNVPASDLDRTPAELKLIQDSAFFHRVDRTTVTSGIVLPSTGDHFSGAFGTPFDARLFNEKNVFTL
VAQHVAESEDLPATYLTVGDDDGFFLWRGAIALHETLQADKRKSELRVTDGDHVWSVWKVSIIDALKFIDGEWDRAADAA
GD

Sequences:

>Translated_322_residues
MVRKNLAALCLFLSCNAALAGQIEDTTFHSPALNAPLPVNIYRPDGAPPENGWPVLYLLHGHDGDQNSWRDLGNIEKTLD
TLIAAGAIRPLVVVMPGVKNSWYVDSAAVGGPGDYETALTGDLRHQIEKTLPVRKDRQGRAIAGLSMGGFGALHLAYGHE
DLYGAVASLSGAIWQNVPASDLDRTPAELKLIQDSAFFHRVDRTTVTSGIVLPSTGDHFSGAFGTPFDARLFNEKNVFTL
VAQHVAESEDLPATYLTVGDDDGFFLWRGAIALHETLQADKRKSELRVTDGDHVWSVWKVSIIDALKFIDGEWDRAADAA
GD
>Mature_322_residues
MVRKNLAALCLFLSCNAALAGQIEDTTFHSPALNAPLPVNIYRPDGAPPENGWPVLYLLHGHDGDQNSWRDLGNIEKTLD
TLIAAGAIRPLVVVMPGVKNSWYVDSAAVGGPGDYETALTGDLRHQIEKTLPVRKDRQGRAIAGLSMGGFGALHLAYGHE
DLYGAVASLSGAIWQNVPASDLDRTPAELKLIQDSAFFHRVDRTTVTSGIVLPSTGDHFSGAFGTPFDARLFNEKNVFTL
VAQHVAESEDLPATYLTVGDDDGFFLWRGAIALHETLQADKRKSELRVTDGDHVWSVWKVSIIDALKFIDGEWDRAADAA
GD

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

Organism=Escherichia coli, GI145693201, Length=180, Percent_Identity=32.7777777777778, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 34897; Mature: 34897

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKNLAALCLFLSCNAALAGQIEDTTFHSPALNAPLPVNIYRPDGAPPENGWPVLYLLH
CCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
GHDGDQNSWRDLGNIEKTLDTLIAAGAIRPLVVVMPGVKNSWYVDSAAVGGPGDYETALT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHH
GDLRHQIEKTLPVRKDRQGRAIAGLSMGGFGALHLAYGHEDLYGAVASLSGAIWQNVPAS
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHH
DLDRTPAELKLIQDSAFFHRVDRTTVTSGIVLPSTGDHFSGAFGTPFDARLFNEKNVFTL
HCCCCCHHEEEEECHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCHHHH
VAQHVAESEDLPATYLTVGDDDGFFLWRGAIALHETLQADKRKSELRVTDGDHVWSVWKV
HHHHHHCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHH
SIIDALKFIDGEWDRAADAAGD
HHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MVRKNLAALCLFLSCNAALAGQIEDTTFHSPALNAPLPVNIYRPDGAPPENGWPVLYLLH
CCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
GHDGDQNSWRDLGNIEKTLDTLIAAGAIRPLVVVMPGVKNSWYVDSAAVGGPGDYETALT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHH
GDLRHQIEKTLPVRKDRQGRAIAGLSMGGFGALHLAYGHEDLYGAVASLSGAIWQNVPAS
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHH
DLDRTPAELKLIQDSAFFHRVDRTTVTSGIVLPSTGDHFSGAFGTPFDARLFNEKNVFTL
HCCCCCHHEEEEECHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCHHHH
VAQHVAESEDLPATYLTVGDDDGFFLWRGAIALHETLQADKRKSELRVTDGDHVWSVWKV
HHHHHHCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHH
SIIDALKFIDGEWDRAADAAGD
HHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]