Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184996
Identifier: 159184996
GI number: 159184996
Start: 1940053
End: 1940502
Strand: Reverse
Name: 159184996
Synonym: Atu1971
Alternate gene names: NA
Gene position: 1940502-1940053 (Counterclockwise)
Preceding gene: 15889267
Following gene: 159184995
Centisome position: 68.29
GC content: 56.22
Gene sequence:
>450_bases ATGTTTAACAGGGTTGTCATTCTCTCATCATTTGCGCTGCTGGCATCGGCGGCGTTTGTCTCCCCCGCAGCCGCACTCAC CATGAAGGAGTGCAGCGTGAAATATCAGGCCGCGAAAGCCGACGGGTCCGCCAAGGATGTCAAGTGGAACGACTATCGCG CAAAGTTCTGTGGCAGTGACGCAGCCGCTGAAGATGCCGCCGATGACAAGCAGGTCGCGGCCACCACCGAAAAAGAACCC GCAAAAGCGACTATAAAGGCCCCAAAGGGTGTCGCTTTTCCGAGTGCTGTCGATAAGAAATATTCAAGCGAGACGCCCGG AAAGGCCCGCCTGAAGACCTGCGTCGACTCCTATCACAAGAACAAGAATGACGGCACGCTCGGTGATCTGAAATGGATCC AGAAGGGCGGCGGCTACTGGAGCCTCTGCAATACCGCTCTCAAGAGCTGA
Upstream 100 bases:
>100_bases TTTGCCGTCAATCGGACTTTTTTCCTTACCGCACTGCTCGTTGACAAGTCGAAAATCCGGTCGGATAGTCGGCCGGCAAT CATGCAACCGGGAGTCTTCA
Downstream 100 bases:
>100_bases GACGGGCAGGAGCGGCGGCCAATGGTCGTTGCTCCGGCATCGCTGCGTTTCCGAAACGGCCTTGGCTAACGCATGTGCCG AATCGGCTGCGATTATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MFNRVVILSSFALLASAAFVSPAAALTMKECSVKYQAAKADGSAKDVKWNDYRAKFCGSDAAAEDAADDKQVAATTEKEP AKATIKAPKGVAFPSAVDKKYSSETPGKARLKTCVDSYHKNKNDGTLGDLKWIQKGGGYWSLCNTALKS
Sequences:
>Translated_149_residues MFNRVVILSSFALLASAAFVSPAAALTMKECSVKYQAAKADGSAKDVKWNDYRAKFCGSDAAAEDAADDKQVAATTEKEP AKATIKAPKGVAFPSAVDKKYSSETPGKARLKTCVDSYHKNKNDGTLGDLKWIQKGGGYWSLCNTALKS >Mature_149_residues MFNRVVILSSFALLASAAFVSPAAALTMKECSVKYQAAKADGSAKDVKWNDYRAKFCGSDAAAEDAADDKQVAATTEKEP AKATIKAPKGVAFPSAVDKKYSSETPGKARLKTCVDSYHKNKNDGTLGDLKWIQKGGGYWSLCNTALKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15877; Mature: 15877
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRVVILSSFALLASAAFVSPAAALTMKECSVKYQAAKADGSAKDVKWNDYRAKFCGSD CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHCCCC AAAEDAADDKQVAATTEKEPAKATIKAPKGVAFPSAVDKKYSSETPGKARLKTCVDSYHK CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHC NKNDGTLGDLKWIQKGGGYWSLCNTALKS CCCCCCHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MFNRVVILSSFALLASAAFVSPAAALTMKECSVKYQAAKADGSAKDVKWNDYRAKFCGSD CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHCCCC AAAEDAADDKQVAATTEKEPAKATIKAPKGVAFPSAVDKKYSSETPGKARLKTCVDSYHK CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHC NKNDGTLGDLKWIQKGGGYWSLCNTALKS CCCCCCHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA