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The map label for this gene is secY [H]

Identifier: 159184982

GI number: 159184982

Start: 1904217

End: 1905557

Strand: Reverse

Name: secY [H]

Synonym: Atu1927

Alternate gene names: 159184982

Gene position: 1905557-1904217 (Counterclockwise)

Preceding gene: 159184983

Following gene: 15889221

Centisome position: 67.06

GC content: 59.13

Gene sequence:

>1341_bases
ATGGCTTCAGCAGCGGAACAACTGGCTTCGAACCTGAATTTTTCGACCTTCGCTAAGGCGGAGGATCTGAAAAAGCGTCT
CTGGTTTACTCTTGCCGCACTTCTCGTCTACCGTCTCGGCACCCACATTCCGCTTCCGGGTCTGAACCCAGAAGCCTATG
CGCAGGCCTTCCGTGGCCAGGCCAACGGTATTCTCGGTCTTTTCAACATGTTTGCGGGTGGCGCCGTCGAGCGCATGGCG
ATCTTCGCCCTCGGCATCATGCCTTACATCTCCGCTTCGATCATCGTGCAGCTCATGACCTCGGTCGTGCCCTCGCTCGA
AGCGTTGAAGAAGGAAGGCGAAGCCGGCCGCAAGATCATCAACCAGTACACCCGCTACGGCACGGTGCTGCTCGGCACGC
TGCAGGCCTATGGCATTGCGGTCGGCCTTGAAAGCGGCAACGGTCTCGTGGTCGATCCGGGCATGTTCTTCCGCGTTTCC
ACCGTCATCACGCTGCTCGGCGGTACGATGTTCCTGATGTGGCTCGGCGAGCAGATCACCTCGCGCGGTATCGGCAACGG
TATTTCGCTGATCATCTTCGCGGGCATCGCCGCAGGCCTGCCCAAGGCTCTGGCTGGCACGCTGGAACTTGGCCGCACCG
GCGCGCTGTCGACCCCGCTCATCCTGATGGTTGTCATTGTGGCGATCGGCGTCATTGCCCTCATCGTCTTCGTGGAGCGC
GCCCAGCGCCGTCTCCTCATACAATATCCGAAGCGACAGGTCGGCAACCGGATGTTCCAGGGCGATACCTCGCACCTGCC
GCTGAAGCTCAACACGGCCGGCGTCATTCCCGCGATCTTCGCATCGTCGCTGCTGCTCCTGCCGGCAACGGCTGCAGGTT
TTGCCGGTAACACCAACCTGCCGACCTGGGCGACCTCGATCATCGCGTCGCTGCAGCATGGCCAGCCGTTGTTCATGGCG
CTCTACGGCCTGCTGATCGCGTTCTTCGCGTTCTTCTACACGGCAATCGTGTTCAATCCGAAGGATACGGCCGATAATCT
CAAGAAGCATGGTGGCTTCATTCCGGGTATCCGTCCGGGCGAGCGCACCGCGGAGTACATCGATTACGTCCTGACCCGCA
TTACCGTGGTCGGCGCGATTTATCTGGTCTTCGTGTGTATCCTTCCTGAGACACTTATCGCACGTACGGGCATTCCGTTA
GCCCTTGGTGGTACTTCGCTTTTGATCGTTGTCAGTGTAACTCTGGATACGGTTGCGCAGATTCAGGGTCACCTGATCGC
CCAGCAATATGAAGGTCTGATCAAGAAGTCGAAGTTGCGTGGAGGAAAGAGGGGACGATGA

Upstream 100 bases:

>100_bases
CAAAGCCGTGTTCGTCCGAAGCCCGTTTTTGAACCGGTATTTTTAGACCTTTCCGCATTGGCCGGTTTCGCTGGCCGGCA
AGGGTCATTCGGAGAAATTT

Downstream 100 bases:

>100_bases
GACTGATATTTTTGGGTCCGCCGGGTGCGGGCAAGGGAACCCAGGCCAAGCGGCTGACTGACAAGTACGGGATCCCGCAG
CTTTCCACCGGTGACATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVERMA
IFALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKIINQYTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVS
TVITLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNLPTWATSIIASLQHGQPLFMA
LYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPL
ALGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR

Sequences:

>Translated_446_residues
MASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVERMA
IFALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKIINQYTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVS
TVITLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNLPTWATSIIASLQHGQPLFMA
LYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPL
ALGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR
>Mature_445_residues
ASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVERMAI
FALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKIINQYTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVST
VITLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVERA
QRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNLPTWATSIIASLQHGQPLFMAL
YGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPLA
LGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=54.6948356807512, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47664; Mature: 47533

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQ
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
ANGILGLFNMFAGGAVERMAIFALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKII
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVSTVITLLGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGIGNGISLIIFAGIAAGLPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVER
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNL
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PTWATSIIASLQHGQPLFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
ERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPLALGGTSLLIVVSVTLDTVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHH
IQGHLIAQQYEGLIKKSKLRGGKRGR
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQ
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
ANGILGLFNMFAGGAVERMAIFALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKII
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVSTVITLLGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGIGNGISLIIFAGIAAGLPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVER
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNL
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PTWATSIIASLQHGQPLFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
ERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPLALGGTSLLIVVSVTLDTVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHH
IQGHLIAQQYEGLIKKSKLRGGKRGR
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA