Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is eamA [H]
Identifier: 159184951
GI number: 159184951
Start: 1843422
End: 1844315
Strand: Reverse
Name: eamA [H]
Synonym: Atu1863
Alternate gene names: 159184951
Gene position: 1844315-1843422 (Counterclockwise)
Preceding gene: 159184952
Following gene: 15889163
Centisome position: 64.9
GC content: 58.61
Gene sequence:
>894_bases ATGGCATTGCCGCATATTTTTCTTGCCCTGATCACCGTGTTTTTGTGGGGCTTCAACTTCGTTGCCATCAAGGTCGGCGT TGCAGACATGCCGCCATTGTTTCTGACGGGGGTGCGTTATCTCTTTGCGGCGGTGCCTCTCGTCTTCTTCCTGCCGAAAC CGAATGTGCCGTGGCGGCATATGATCGTTTACGGCATGGCGATGGGCTTTTTTCAGTTCGGCCTGCTTTATCCGGCCATC AAGCTCGGCTTGCCCGCCGGGCTTGCTTCGCTCGTCATGCAGTCGCAGGCCTTCTTCACGCTGGCGCTCGCCGTGGTGTT TCTCGGCGAGCGGCCATTGCCCTCACAAATCGCCGGCGCGATCGTTGCCTTTGGCGGGCTGGCGGTCATCGGCATGGAGC GCATGACGGCTGCAGCGCTTATACCGCTCCTGATGGGAGTCGGCTCGGCCATTGCCTGGGCCTGCGGCAACATCGTCAAT CGCCGCATCGGCCAAGTAAATGTGGTCTCCTTTATTGCATGGACGAGCCTTGTACCCGTTCTGCCGTTGGTCTTGCTTTC GCTGGTGGTGGAAGGCCCAGATGCGATTGTGGAAGGGCTGCAAAATGCGACGCCGACGATGGCTCTCGTGGTGATCTATA TGGCCTATGGCGCAACAATAGTCGGTGCGGGCATCTGGAGTTATCTGCTTTTGCGTTATCCCGCCGGAACGGTGGCGCCG TTTTCCCTGCTGGTGCCGATCGTCGGTTTCATCAGCGCTTATCTGGCGTTTGCGGAGCATATTACCATCTTCGAAATCAT CGGTGCGGCGCTGGTCATTCTCGGGCTGGCGCTTAACGTCTTCGGTCGGCGCATTGGCGTTTCACGCTTCTGGGTCAGGT CTCCGCAGGGCTGA
Upstream 100 bases:
>100_bases GGCGGTCTCCTGATTGGCGCCGGTCTCATTGCCTTTGGCTGGAAGAGGGCGGTTTCGGCGTGAAACGCCCGTCGATCGCC TGAAATTCGGACATAACAAA
Downstream 100 bases:
>100_bases GCGTGAATTGCCTGTGCATTATCGGCACGGATGAGACGCAAGGGCCGATTTTTTGGTAAAGAGCATGTCCGGCCGCGCCT AAGGGAATCGGCCGGATGAA
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRHMIVYGMAMGFFQFGLLYPAI KLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGAIVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVN RRIGQVNVVSFIAWTSLVPVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAP FSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSRFWVRSPQG
Sequences:
>Translated_297_residues MALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRHMIVYGMAMGFFQFGLLYPAI KLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGAIVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVN RRIGQVNVVSFIAWTSLVPVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAP FSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSRFWVRSPQG >Mature_296_residues ALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRHMIVYGMAMGFFQFGLLYPAIK LGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGAIVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVNR RIGQVNVVSFIAWTSLVPVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAPF SLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSRFWVRSPQG
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=275, Percent_Identity=42.5454545454545, Blast_Score=218, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31732; Mature: 31601
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRH CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH MIVYGMAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVNRRIGQVNVVSFIAWTSLVPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAP HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSRFWVRSPQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC >Mature Secondary Structure ALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRH CCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH MIVYGMAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVNRRIGQVNVVSFIAWTSLVPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAP HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSRFWVRSPQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]