Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184913
Identifier: 159184913
GI number: 159184913
Start: 1760890
End: 1761693
Strand: Direct
Name: 159184913
Synonym: Atu1776
Alternate gene names: NA
Gene position: 1760890-1761693 (Clockwise)
Preceding gene: 159184912
Following gene: 159184915
Centisome position: 61.97
GC content: 60.07
Gene sequence:
>804_bases ATGTTCGGGCTTGTCGCACTGCCCCTCATCCGCAAGCGCAACGACCGCTGGGTGGACATCGTCAAGACGACGAACCGCCC CTTGTGGATCATCCGCTTTTTTTCCGCCGGTATCGGCGCGGTGGGCAGCGTCACCGCCTTCACTCATCTTTCCATGGCTG AGGCCTTCGCGCTGATCTTCCTGCTGCCTTCCTTCGTGACCATCATGTCCGTTGTGTTTTTGAAGGAACAGGTAGGCATC CGCCGCTGGTCTGCGGTCATCATCGGTTTCCTTGGCGTGCTCATCATTCTGCGCCCGGGTTTCCGCGAATTGGGTGTCGG CCATCTCGGCGCCATCGTCGCTGGCTTCGGCGGTGCACTCAGCATCGTCATCTTCCGCGCCATGGGCCCATCGGAAAAAA ACGTATCACTCTACGGCGCCGGCGTTCTCGGCTGTCTTGCCATATCGGGTGTCGCCATGATCCCGACCTTTGTCATGCCC GGCGGCGAACAATGGTTGCTGCTGGCAGGATACGGCCTGCTCGGCGCTCTCGGCAACGTACTGGTCATGTATGCCGCTCA ATATGCGCCCGCCGCCATGATCGGCCCGACGCAATATAGCCAGATGCTCTGGGCCATCCTGTTCGGTTATCTGATTTTCG GTGATCGCATCGACGGATGGATGCTCATCGGCATCGCTCTCATTGTCGGCTCCGGCCTGCTGACGCTTATCCGCGAAAAG CAGCGAAAAGTGCCGCTGCCCGCCTCCATTGCCGCGACCGACCAGAACGTGGCTGTCGGCATTACACCGGAAGATGGGCA CTGA
Upstream 100 bases:
>100_bases GCTTGCCTTTGCCGCCTTCGCTGCCTACGCATGGAGCGACGCGAGCGTTAAACTCATAGAAGGCCAGATTTCGCCGATCG AATCGGCCTTCTTTGGCGCA
Downstream 100 bases:
>100_bases CGCCTTAAGAATGCATTAGAACCGGCGACGCGTATTCACGTCGCCGGAATGGCATTCGATCAATCACAAACCCTGACCCG ATACATGTCGCCCCAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane; Permease; Transmembrane Protein; Transporter Dme Family; Transporter Permease Protein; Transporter RhaT Family DMT Superfamily; Permease DMT Superfamily; Drug/Metabolite Transporter; Permeases Of Drug/Metabolite Transporter; DMT Family Permease; Integral Membrane ; Transporter Protein; DMT Superfamily Permease; Dme Family Transporter; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Integral Membrane Protein; Transporter RhaT Family DMT Superfamily Protein; Transporter DME Family; Transmembrane Transporter; Transporter RarD Family DMT Superfamily; Permease Protein; RhaT Family Transporter
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIFLLPSFVTIMSVVFLKEQVGI RRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGALSIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMP GGEQWLLLAGYGLLGALGNVLVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK QRKVPLPASIAATDQNVAVGITPEDGH
Sequences:
>Translated_267_residues MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIFLLPSFVTIMSVVFLKEQVGI RRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGALSIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMP GGEQWLLLAGYGLLGALGNVLVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK QRKVPLPASIAATDQNVAVGITPEDGH >Mature_267_residues MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIFLLPSFVTIMSVVFLKEQVGI RRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGALSIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMP GGEQWLLLAGYGLLGALGNVLVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK QRKVPLPASIAATDQNVAVGITPEDGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24645940, Length=247, Percent_Identity=24.6963562753036, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28531; Mature: 28531
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIF CCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHH LLPSFVTIMSVVFLKEQVGIRRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHH SIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMPGGEQWLLLAGYGLLGALGNV HHHHHHHCCCCCCCEEEECHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHH LVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK HHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QRKVPLPASIAATDQNVAVGITPEDGH HHCCCCCCEEEECCCCEEEEECCCCCC >Mature Secondary Structure MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIF CCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHH LLPSFVTIMSVVFLKEQVGIRRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHH SIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMPGGEQWLLLAGYGLLGALGNV HHHHHHHCCCCCCCEEEECHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHH LVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK HHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QRKVPLPASIAATDQNVAVGITPEDGH HHCCCCCCEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA