Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is metF
Identifier: 159184904
GI number: 159184904
Start: 1748259
End: 1749179
Strand: Direct
Name: metF
Synonym: Atu1764
Alternate gene names: NA
Gene position: 1748259-1749179 (Clockwise)
Preceding gene: 159184903
Following gene: 159184906
Centisome position: 61.52
GC content: 61.02
Gene sequence:
>921_bases ATGGTAACAAAAAGGATCATGCTCAAATTGCCCGATATTTCCGCCGCCTCCCTCATTCCCGCCTCCATCGAAGCCTCACC CGCGCAGGTACTCGGCCCGGCAAGCCTCGCCGGGATATTTCCTCGGGGTGTCCGCGTCTATTTGACGGATACCGGAGCAG CCTCGCAGGAAAAGCTGGTGGATGCCGCCACACATCTGCGCAATCTCGGTTATGAACCGGTGCCGCATCTTGCAGCGCGC CGCATCCCTTCGCGCGTGGAATTTGAGGAGCAGGTCAAGCGGTTGGCGGGAGAAGCGGATGTTACCGATGTTCTGGTCGT CGGCGGAGGTGTCGACAGGCCGGCTGGTCCTTTCGCCTCCAGCATGGACATGCTGTCGTCAGGCATTTTCGACCGTTACG GCATCAAAAAGATCGCAATCGCCGGCCATCCCGAAGGCAGCCCCGATTTCAGCGAGGAGACGGCGATCGCTGCCCTGAGG CTGAAACGCGATTTTGGCGAAAGAAGCGATGCGGCCATGCGCATCGTCACCCAGTTCGGTTTCGATCCCGCGCGTTTCAT CGCCTGGGCGGAAGGCCTTGCAGCGTCAGGCATCGATCTGCCCGTGCATATCGGCGTTTCCGGCCCGGCCAAAATCACGA CGCTGCTGAAATATGCAGCACTCTGCGGTGTCGGCAATTCCATCGCCTATCTCAAGAAAAACGCGCTTTCCCTGACCACA CTCGCCAGGGGCCATTCGCCTGACAGCATCGTCGGACCGATCGAGCGGCACTGGCAGGCCAATCCGCAGGGGCCGATCCG GCAAATTCACGTCTTCCCCTTTGGCGGATTGCAGAATTCCGCCGACTGGCTGGTCAGCCGCGGAAGCTGGCAAACCCGCG ACGCAGGCCGTCCGGCGCCGGCGGATTCAATGGCTGGCTAA
Upstream 100 bases:
>100_bases GATCTGGTAAAACCGCGCGCAAGCACCTGCAACCAAGCCTCGTCGCAGATGCAAGCCTGTCTTGCCGCAACAGACACAGA CTTCGGCGGAAAAACGGTGC
Downstream 100 bases:
>100_bases AAGCCGCCTTCCACACGGCGCTACCCAGACTTTACGCCGCCTTTGCGACCTCGACAAAGGCATTGCGGATGCTCTCTGCC ACCGCAAGAACAGGGCGCGA
Product: methylenetetrahydrofolate reductase
Products: NA
Alternate protein names: 5 10-Methylenetetrahydrofolate Reductase; Methylenetetrahydrofolate Reductase Family Protein; Metfprotein-Like; MetF-Like Protein; Metfprotein -Like Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLVDAATHLRNLGYEPVPHLAAR RIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFASSMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALR LKRDFGERSDAAMRIVTQFGFDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTT LARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAPADSMAG
Sequences:
>Translated_306_residues MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLVDAATHLRNLGYEPVPHLAAR RIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFASSMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALR LKRDFGERSDAAMRIVTQFGFDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTT LARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAPADSMAG >Mature_306_residues MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLVDAATHLRNLGYEPVPHLAAR RIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFASSMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALR LKRDFGERSDAAMRIVTQFGFDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTT LARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAPADSMAG
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32463; Mature: 32463
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLV CCCCEEEEECCCCCHHHHCCCCCCCCCHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHH DAATHLRNLGYEPVPHLAARRIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFAS HHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHH SMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALRLKRDFGERSDAAMRIVTQFG HHHHHHHCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC FDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTT CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEH LARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAP HHCCCCCCHHCCCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCCC ADSMAG CCCCCC >Mature Secondary Structure MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLV CCCCEEEEECCCCCHHHHCCCCCCCCCHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHH DAATHLRNLGYEPVPHLAARRIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFAS HHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHH SMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALRLKRDFGERSDAAMRIVTQFG HHHHHHHCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC FDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTT CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEH LARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAP HHCCCCCCHHCCCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCCC ADSMAG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA