Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fmt [C]
Identifier: 159184903
GI number: 159184903
Start: 1747392
End: 1748168
Strand: Direct
Name: fmt [C]
Synonym: Atu1763
Alternate gene names: 159184903
Gene position: 1747392-1748168 (Clockwise)
Preceding gene: 159185435
Following gene: 159184904
Centisome position: 61.49
GC content: 60.36
Gene sequence:
>777_bases ATGACTGACATCAACAATCGGCTTCTCGTGATGACGGCAGGTGGCGCAAACCCCAATGTCATGATCAATGCATTGGCCGC CCGTTTTCCGGATATCCACGTCTTCATGGAGCAGCCGGAAAGCAAGTCGGCCATTCTCAAACGCCGGGCACGGCGGCTCG GCTGGTTTGCCGCCGCGGGCCAGATGGCGACAATGGTTGCATCCCGCCTTGGCAAACGCTTCACGGCCCGAAGAAGCCAT GAAATCATCGCCGAACACGGTCTGTCTGCCGATCTCCACCACGGTCTTCCCATCACGCAATTTACCTCACTGAACGACGA AGAATGCCAGAAGGCCGCCAATCTGCTGAAACCGGCGGTAATCTTCACCATTTCCTGCCGCCTGTTAACGCCGGCGACGC TGCGGACCCTGCAATGTCCGGTCATCAATTTCCACGCCGGTATCAATCCCGCCTATCGCGGCCAGATGGGCGGTTATTGG GCGCTGGTGGAAAAGGACCGCGGCAATTTCGGCGCGACCGTGCATCTGGTCGACAAGGGCGTGGATACCGGCGCCACGCT TTATGAAAAACGGCTGAAACCCTCGCCCTCCGACACCATCGCCACCTATCCGCTGCTTTTGACCGCCGCCTCGGTGGATA TCGCCGTCAGCGCCATCGAGGACGCCCTGTCCGGCAGCCTCGCGCCGCAGCCGCCCTCGCCCGGAAAATCGGTGCTGCGC TTTCCGCCACCGATCTGGACATGGTTGTGGAACGGCCTGACGAAACGGATCTGGTAA
Upstream 100 bases:
>100_bases GCATTTCAAAAAATCCTGTCGATGAAAATTAACAGGGTTTTGAAGTTCCCAAGAGAAACTAGGTGCCAGGATCGTGGCTT AGGAAATTTCCGTGGGTGAT
Downstream 100 bases:
>100_bases AACCGCGCGCAAGCACCTGCAACCAAGCCTCGTCGCAGATGCAAGCCTGTCTTGCCGCAACAGACACAGACTTCGGCGGA AAAACGGTGCATGGTAACAA
Product: hypothetical protein
Products: tetrahydrofolate; N-formylmethionyl-tRNA [C]
Alternate protein names: Formyl Transferase Domain Protein; Formyl Transferase-Like Protein; Formyltransferase Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTDINNRLLVMTAGGANPNVMINALAARFPDIHVFMEQPESKSAILKRRARRLGWFAAAGQMATMVASRLGKRFTARRSH EIIAEHGLSADLHHGLPITQFTSLNDEECQKAANLLKPAVIFTISCRLLTPATLRTLQCPVINFHAGINPAYRGQMGGYW ALVEKDRGNFGATVHLVDKGVDTGATLYEKRLKPSPSDTIATYPLLLTAASVDIAVSAIEDALSGSLAPQPPSPGKSVLR FPPPIWTWLWNGLTKRIW
Sequences:
>Translated_258_residues MTDINNRLLVMTAGGANPNVMINALAARFPDIHVFMEQPESKSAILKRRARRLGWFAAAGQMATMVASRLGKRFTARRSH EIIAEHGLSADLHHGLPITQFTSLNDEECQKAANLLKPAVIFTISCRLLTPATLRTLQCPVINFHAGINPAYRGQMGGYW ALVEKDRGNFGATVHLVDKGVDTGATLYEKRLKPSPSDTIATYPLLLTAASVDIAVSAIEDALSGSLAPQPPSPGKSVLR FPPPIWTWLWNGLTKRIW >Mature_257_residues TDINNRLLVMTAGGANPNVMINALAARFPDIHVFMEQPESKSAILKRRARRLGWFAAAGQMATMVASRLGKRFTARRSHE IIAEHGLSADLHHGLPITQFTSLNDEECQKAANLLKPAVIFTISCRLLTPATLRTLQCPVINFHAGINPAYRGQMGGYWA LVEKDRGNFGATVHLVDKGVDTGATLYEKRLKPSPSDTIATYPLLLTAASVDIAVSAIEDALSGSLAPQPPSPGKSVLRF PPPIWTWLWNGLTKRIW
Specific function: Modifies The Free Amino Group Of The Aminoacyl Moiety Of Methionyl-Trna(Fmet). The Formyl Group Appears To Play A Dual Role In The Initiator Identity Of N-Formylmethionyl-Trna By: (I) Promoting Its Recognition By If2 And (II) Impairing Its Binding To Eftu
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.2.9 [C]
Molecular weight: Translated: 28203; Mature: 28072
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDINNRLLVMTAGGANPNVMINALAARFPDIHVFMEQPESKSAILKRRARRLGWFAAAG CCCCCCEEEEEEECCCCCCCEEEEHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH QMATMVASRLGKRFTARRSHEIIAEHGLSADLHHGLPITQFTSLNDEECQKAANLLKPAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHCCCCCHHHHHHHHHHHCCEE IFTISCRLLTPATLRTLQCPVINFHAGINPAYRGQMGGYWALVEKDRGNFGATVHLVDKG EEEEEEEEECCHHHHHEECCEEEEECCCCHHHCCCCCCEEEEEEECCCCCCCEEEEEECC VDTGATLYEKRLKPSPSDTIATYPLLLTAASVDIAVSAIEDALSGSLAPQPPSPGKSVLR CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE FPPPIWTWLWNGLTKRIW CCCHHHHHHHHHHHHHCC >Mature Secondary Structure TDINNRLLVMTAGGANPNVMINALAARFPDIHVFMEQPESKSAILKRRARRLGWFAAAG CCCCCEEEEEEECCCCCCCEEEEHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH QMATMVASRLGKRFTARRSHEIIAEHGLSADLHHGLPITQFTSLNDEECQKAANLLKPAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHCCCCCHHHHHHHHHHHCCEE IFTISCRLLTPATLRTLQCPVINFHAGINPAYRGQMGGYWALVEKDRGNFGATVHLVDKG EEEEEEEEECCHHHHHEECCEEEEECCCCHHHCCCCCCEEEEEEECCCCCCCEEEEEECC VDTGATLYEKRLKPSPSDTIATYPLLLTAASVDIAVSAIEDALSGSLAPQPPSPGKSVLR CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE FPPPIWTWLWNGLTKRIW CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Ca2+; K+; Mg2+; Na+; NH4+ [C]
Kcat value (1/min): 1200 [C]
Specific activity: 1.14
Km value (mM): 0.013 {10-formyltetrahydrofolate}} 0.0013 {phenylalanyl-tRNAfMet}} 0.0006 {methionyl-tRNAfMet}} 0.00035 {methionyl-tRNAfMet}} 0.0014 {valyl-tRNAfMet}} [C]
Substrates: Formyltetrahydrofolate; L-methionyl-tRNA; H2O [C]
Specific reaction: Formyltetrahydrofolate + L-methionyl-tRNA + H2O =tetrahydrofolate + N-formylmethionyl-tRNA [C]
General reaction: Formyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA