Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184901
Identifier: 159184901
GI number: 159184901
Start: 1741892
End: 1742200
Strand: Reverse
Name: 159184901
Synonym: Atu1756
Alternate gene names: NA
Gene position: 1742200-1741892 (Counterclockwise)
Preceding gene: 15889061
Following gene: 15889057
Centisome position: 61.31
GC content: 54.37
Gene sequence:
>309_bases TTGGTAGTCATCTACGCCGCTGGATTTAAAGCGGTTTTCCACGCCCCGCAATTTTTGTGGTGGCATGTGGTCGGCTCGCA GGGCTTGGCGAAGACGTGGATTTCCCGTTTTGGGATGAGTGTTTCAGGCTGGAACAGTCCGAAAAGGGCGGCGAAAAAAC TTCAAAAAAATCGCATTTTTCTTGGAAAAATCTTTGAAGACCGGCTTTTGCGGCCGCCCAAGGCGATAATCTGGGCCGAT CTGGTGTGCAGCTGGCCCTCATCATCGCATTCTCCGATCCGCGCGCCTCACAGGCGCGGGATGGCGTAG
Upstream 100 bases:
>100_bases TTCAGCAAATTAGCGGCTATTTTGAACTGTATTTGAGTGAGTTTTTACGCGTTTTTGAGGCAAATTTTATCACAATTTTA CGCATTCCCGTCTTAGGCTT
Downstream 100 bases:
>100_bases GCGTCACGGCATGGCCATGGGCGTTTTGCAGCGAGAATGGGAGAATGAAGGCTTCCGAGGTGAAGCGGTGCTTGCGGGAA GGCAATCTTTGCATCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MVVIYAAGFKAVFHAPQFLWWHVVGSQGLAKTWISRFGMSVSGWNSPKRAAKKLQKNRIFLGKIFEDRLLRPPKAIIWAD LVCSWPSSSHSPIRAPHRRGMA
Sequences:
>Translated_102_residues MVVIYAAGFKAVFHAPQFLWWHVVGSQGLAKTWISRFGMSVSGWNSPKRAAKKLQKNRIFLGKIFEDRLLRPPKAIIWAD LVCSWPSSSHSPIRAPHRRGMA >Mature_102_residues MVVIYAAGFKAVFHAPQFLWWHVVGSQGLAKTWISRFGMSVSGWNSPKRAAKKLQKNRIFLGKIFEDRLLRPPKAIIWAD LVCSWPSSSHSPIRAPHRRGMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11585; Mature: 11585
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVIYAAGFKAVFHAPQFLWWHVVGSQGLAKTWISRFGMSVSGWNSPKRAAKKLQKNRIF CEEEEECCHHHHHHCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH LGKIFEDRLLRPPKAIIWADLVCSWPSSSHSPIRAPHRRGMA HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVVIYAAGFKAVFHAPQFLWWHVVGSQGLAKTWISRFGMSVSGWNSPKRAAKKLQKNRIF CEEEEECCHHHHHHCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH LGKIFEDRLLRPPKAIIWADLVCSWPSSSHSPIRAPHRRGMA HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA