Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15889061
Identifier: 15889061
GI number: 15889061
Start: 1743249
End: 1743683
Strand: Reverse
Name: 15889061
Synonym: Atu1758
Alternate gene names: NA
Gene position: 1743683-1743249 (Counterclockwise)
Preceding gene: 159184902
Following gene: 159184901
Centisome position: 61.36
GC content: 62.3
Gene sequence:
>435_bases ATGCCTCTACATCTCATTAAACTTTGCGTCGGTGCGGACTCCCTTCAGGATTTGAGGGAGTGGGTGGCGCATCGATCCCT GACGGCCATTGCCGCCGGCCTTGAGCCGCATAGCGTCCACACCACCCGGATGATCCCGAAACGGGTCGAGGAACTGCTGG AAGGCGGTTCGCTTTACTGGGTCATCAAGGGTCAGGTGCAGGCGCGGCAGAATCTGCTCGATATCCGCTCCTTCAAGGGG GATGACGGTATTACCCGCTGCGATCTCATTCTGGGCCCCGAGGTGATCGAGACCTCGCCAGCGCCAAAGCGGCCGTTCCA GGGCTGGCGTTACCTGAAGGATGACGAGGCGCCACGCGATCTCGGTGGCGGCGGAGGCGGGGAAGACATGCCCTCGGACC TCAGGCGGGAACTGGCCGAGCTTGGCTTGCTCTGA
Upstream 100 bases:
>100_bases CCGGCGGCCTCGCCGTCAACGTTGTGGAGTGCTGAGCGGGCAGGGCGTGAGGCACCGTCCAGATGCTTGACGCCCGTCGC AAAAAGGCATTGATAGGGGC
Downstream 100 bases:
>100_bases CGTTCCATGGATGAAAATGAAATCCTTGTGTCGCCGGCCGAGTCGATGGTGTCCTGAAAGCTATCCTCCGTCATGCTCGG GCCTGTCCCGAGCATCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPLHLIKLCVGADSLQDLREWVAHRSLTAIAAGLEPHSVHTTRMIPKRVEELLEGGSLYWVIKGQVQARQNLLDIRSFKG DDGITRCDLILGPEVIETSPAPKRPFQGWRYLKDDEAPRDLGGGGGGEDMPSDLRRELAELGLL
Sequences:
>Translated_144_residues MPLHLIKLCVGADSLQDLREWVAHRSLTAIAAGLEPHSVHTTRMIPKRVEELLEGGSLYWVIKGQVQARQNLLDIRSFKG DDGITRCDLILGPEVIETSPAPKRPFQGWRYLKDDEAPRDLGGGGGGEDMPSDLRRELAELGLL >Mature_143_residues PLHLIKLCVGADSLQDLREWVAHRSLTAIAAGLEPHSVHTTRMIPKRVEELLEGGSLYWVIKGQVQARQNLLDIRSFKGD DGITRCDLILGPEVIETSPAPKRPFQGWRYLKDDEAPRDLGGGGGGEDMPSDLRRELAELGLL
Specific function: Unknown
COG id: COG5458
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15948; Mature: 15816
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHLIKLCVGADSLQDLREWVAHRSLTAIAAGLEPHSVHTTRMIPKRVEELLEGGSLYW CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEE VIKGQVQARQNLLDIRSFKGDDGITRCDLILGPEVIETSPAPKRPFQGWRYLKDDEAPRD EEECCHHHHHHHHHHHHCCCCCCCEEEHEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC LGGGGGGEDMPSDLRRELAELGLL CCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PLHLIKLCVGADSLQDLREWVAHRSLTAIAAGLEPHSVHTTRMIPKRVEELLEGGSLYW CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEE VIKGQVQARQNLLDIRSFKGDDGITRCDLILGPEVIETSPAPKRPFQGWRYLKDDEAPRD EEECCHHHHHHHHHHHHCCCCCCCEEEHEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC LGGGGGGEDMPSDLRRELAELGLL CCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA