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The map label for this gene is yrbE [C]

Identifier: 159184854

GI number: 159184854

Start: 1630522

End: 1631682

Strand: Reverse

Name: yrbE [C]

Synonym: Atu1647

Alternate gene names: 159184854

Gene position: 1631682-1630522 (Counterclockwise)

Preceding gene: 15888959

Following gene: 159184853

Centisome position: 57.42

GC content: 60.55

Gene sequence:

>1161_bases
ATGCAAGAACAGGACACACGGCAACAGGCGAACCCGGCCGCAATCACCGAAGACGATGCCGTCTCCGGCGGCGGCTCGCG
TTATGTCTTGAGCGGCTCCTGGCGCAACAGCAATCTCTCCGGCATTTTCGAAAGTCTCGACAGGATTGAAAAAAGCAAAC
CTGCCAGTCCTGTGGATATCGATCTCTCCGCCGTGGAGGCGATCGATACGACGGGCGCGTGGATCATTCAGCGCCTGCGC
AAGGACCTTGAGGCGAGTGGCGCAACCGTCACGCTCACCGGCAATGACCGGATCGAGGACGTGATTGGCCAATTGCCCGA
CAAGGCCGAGATGGACGTCGAACCCGTTGCCCGCGAAGGGCTGGTAGAACGCATTTTTGCGCCCATCGGCCAGGCCGTGG
TTCAGAACGGCGCGGATTTCCTGGCGGGCATGTATATTCTCGGCTCGGCCGTGCGCGGCGCGCAGATGAAGCTCGGGCGC
GGGCGCGGTGTATCGCCGGCGGCGATCGTCAACCAGATCGACCATATGGGCGTGCGCGCCGTGCCGATCATCATGCTGAT
GTCGTTCCTGATCGGCGCCATCATCGCCCAGCAGGGCGCGTTCCAGCTCAGATATTTCGGTGCGGAAGTCTTCGTCGTCG
ATCTCGTCGGCATTCTGCAATTGCGTGAAATCGGTGTGCTGCTGACCGCGATCATGATCGCTGGCCGGTCCGGCAGCGCG
ATCACGGCCGAAATCGGCTCGATGAAGATGCGCGAGGAAATCGACGCGCTGAAGGTGATCGGGCTCAATCCAGTTGGCGT
GCTGGTGTTTCCGCGGTTGGTGGCTCTGACAATTGCGCTGCCGCTTTTGACCATCCTTGCCAATTTCGCTGCACTTTTCG
GCGCGGCCATCGTGGCGCTGGCCTATTCCGGCATTACCTTCGAGGTGTTCCTGTCGCGCCTGCATGGCGCGGTTGAGGAA
TCGACCATCGCAGCCGGCATGATCAAGGCGCCGTTCATGGCGCTGATCATCGGCATCGTTGCGGCGGTCGAGGGCATGAA
GGTGGGCGGTTCGGCGGAATCGCTCGGCAAACACGTCACCTCGTCGGTGGTGAAGTCTATCTTCGTCGTCATTCTGGTGG
ATGGTCTTTTTGCCATCTTCTACGCAGCCATCGATTTTTAG

Upstream 100 bases:

>100_bases
AATTTATCGCGAATTGTCGGCCGTCACTGTGGCTTGCCGAAGGCCAAACCGTTATGAAACCATTAAGAATCTCGTGACGG
CTGCACTCGCTCGGAGCATT

Downstream 100 bases:

>100_bases
GGAGGGCGCGTTGGAAACTCAGGACCAGAAACCGCAAGAGACGAAAACTGCGAAGAACGGCCGCGAGGCGGTGCTTTCCG
TCGAGGGCGTGACTGTCGGT

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MQEQDTRQQANPAAITEDDAVSGGGSRYVLSGSWRNSNLSGIFESLDRIEKSKPASPVDIDLSAVEAIDTTGAWIIQRLR
KDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVAREGLVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGR
GRGVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSA
ITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLHGAVEE
STIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGLFAIFYAAIDF

Sequences:

>Translated_386_residues
MQEQDTRQQANPAAITEDDAVSGGGSRYVLSGSWRNSNLSGIFESLDRIEKSKPASPVDIDLSAVEAIDTTGAWIIQRLR
KDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVAREGLVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGR
GRGVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSA
ITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLHGAVEE
STIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGLFAIFYAAIDF
>Mature_386_residues
MQEQDTRQQANPAAITEDDAVSGGGSRYVLSGSWRNSNLSGIFESLDRIEKSKPASPVDIDLSAVEAIDTTGAWIIQRLR
KDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVAREGLVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGR
GRGVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSA
ITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLHGAVEE
STIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGLFAIFYAAIDF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=207, Percent_Identity=29.4685990338164, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40710; Mature: 40710

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50801 STAS ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQDTRQQANPAAITEDDAVSGGGSRYVLSGSWRNSNLSGIFESLDRIEKSKPASPVDI
CCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DLSAVEAIDTTGAWIIQRLRKDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVAREG
CHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHH
LVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGRGRGVSPAAIVNQIDHMGVRA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCHHH
VPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSA
HHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVAL
EEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSGITFEVFLSRLHGAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SSVVKSIFVVILVDGLFAIFYAAIDF
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEQDTRQQANPAAITEDDAVSGGGSRYVLSGSWRNSNLSGIFESLDRIEKSKPASPVDI
CCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DLSAVEAIDTTGAWIIQRLRKDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVAREG
CHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHH
LVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGRGRGVSPAAIVNQIDHMGVRA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCHHH
VPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSA
HHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVAL
EEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSGITFEVFLSRLHGAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SSVVKSIFVVILVDGLFAIFYAAIDF
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA