Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888959
Identifier: 15888959
GI number: 15888959
Start: 1633064
End: 1633894
Strand: Reverse
Name: 15888959
Synonym: Atu1649
Alternate gene names: NA
Gene position: 1633894-1633064 (Counterclockwise)
Preceding gene: 159184855
Following gene: 159184854
Centisome position: 57.5
GC content: 60.89
Gene sequence:
>831_bases GTGGCCGGTCAAATCGAAACCAGACAGTTCAGAACGCTTTTCATTTCGGATGTTCATCTTGGCTCCAAGGCGGCCAAGAC GGATTTCCTGCTCGACTTCCTGAAATACCACGAGGCCGAGACGATCATCATGGTCGGCGACATCGTCGACGGCTGGCGGC TGCGCCGCAGCTGGTACTGGCCGCAGGGCTGCAACGACGTGGTGCAGAAGCTGCTGCGCAAGGCCCGCAAGGGAACCCGC ATCGTTTACATTCCCGGCAATCACGACGAATTCCTGCGGGAATTTCCGGGCATGCATTTCGGCGGCATCGAAGTGGCCGA GCGCATGATCCACGAGGCTGCCGACGGCAAGAAATATCTCGTCATCCACGGCGACGAGTTCGACGTGGTGGTGCGCAACG CCCGCCTGCTCGCCTATCTCGGCGACTGGGCCTATGACGCGGCAATCGCCATCAACATCGCCATCGCCGCCGTGCGCCGC CGCATCGGCCTGCCTTACTGGTCGTTCTCGGCCTGGGCCAAGCTGCAGGTCAAACACGCCGTCAACTTCATCGGCGAGTT CCAGCGCGTGGTGGCCGACGAGGCGCGGCGCAACAATGTCGACGGCGTGATCTGTGGTCACATTCACCACGCCATCATGG AAGACATGGACGGCATTCGCTACATCAACACCGGCGACTGGGTGGAGAGCTGCACGGCGATTGCCGAAAATGCCGATGGC AGCTTCGAGCTGATCACCTGGATGCAGACGAGTGAAGCCACCGCTGAACATGCTTCGGATGAAATGGAGCCGGTGAATAT TCCGGGGCTGATCGGCAAGCACGCGGCGTGA
Upstream 100 bases:
>100_bases TCCATACAAAAACCCGCCGCTGTCATGTTGCTGAAACACGAGTCTGGTTCTGAGAGGTAAGAAAGCCGCAGGGACGCAAC CGAACAGGGGGAATAAATCC
Downstream 100 bases:
>100_bases TTGGGACCTGCGGGCTAAAGGGATACCTGGCCTTCGGTGTTTTCCTTGAGATCAATACGCGCTCGTGTGGGGCGAGTGGA TGTCGCTTGTTTCTTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAGQIETRQFRTLFISDVHLGSKAAKTDFLLDFLKYHEAETIIMVGDIVDGWRLRRSWYWPQGCNDVVQKLLRKARKGTR IVYIPGNHDEFLREFPGMHFGGIEVAERMIHEAADGKKYLVIHGDEFDVVVRNARLLAYLGDWAYDAAIAINIAIAAVRR RIGLPYWSFSAWAKLQVKHAVNFIGEFQRVVADEARRNNVDGVICGHIHHAIMEDMDGIRYINTGDWVESCTAIAENADG SFELITWMQTSEATAEHASDEMEPVNIPGLIGKHAA
Sequences:
>Translated_276_residues MAGQIETRQFRTLFISDVHLGSKAAKTDFLLDFLKYHEAETIIMVGDIVDGWRLRRSWYWPQGCNDVVQKLLRKARKGTR IVYIPGNHDEFLREFPGMHFGGIEVAERMIHEAADGKKYLVIHGDEFDVVVRNARLLAYLGDWAYDAAIAINIAIAAVRR RIGLPYWSFSAWAKLQVKHAVNFIGEFQRVVADEARRNNVDGVICGHIHHAIMEDMDGIRYINTGDWVESCTAIAENADG SFELITWMQTSEATAEHASDEMEPVNIPGLIGKHAA >Mature_275_residues AGQIETRQFRTLFISDVHLGSKAAKTDFLLDFLKYHEAETIIMVGDIVDGWRLRRSWYWPQGCNDVVQKLLRKARKGTRI VYIPGNHDEFLREFPGMHFGGIEVAERMIHEAADGKKYLVIHGDEFDVVVRNARLLAYLGDWAYDAAIAINIAIAAVRRR IGLPYWSFSAWAKLQVKHAVNFIGEFQRVVADEARRNNVDGVICGHIHHAIMEDMDGIRYINTGDWVESCTAIAENADGS FELITWMQTSEATAEHASDEMEPVNIPGLIGKHAA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31211; Mature: 31080
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQIETRQFRTLFISDVHLGSKAAKTDFLLDFLKYHEAETIIMVGDIVDGWRLRRSWYW CCCCCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCC PQGCNDVVQKLLRKARKGTRIVYIPGNHDEFLREFPGMHFGGIEVAERMIHEAADGKKYL CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEE VIHGDEFDVVVRNARLLAYLGDWAYDAAIAINIAIAAVRRRIGLPYWSFSAWAKLQVKHA EEECCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VNFIGEFQRVVADEARRNNVDGVICGHIHHAIMEDMDGIRYINTGDWVESCTAIAENADG HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCC SFELITWMQTSEATAEHASDEMEPVNIPGLIGKHAA CEEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGQIETRQFRTLFISDVHLGSKAAKTDFLLDFLKYHEAETIIMVGDIVDGWRLRRSWYW CCCCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCC PQGCNDVVQKLLRKARKGTRIVYIPGNHDEFLREFPGMHFGGIEVAERMIHEAADGKKYL CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEE VIHGDEFDVVVRNARLLAYLGDWAYDAAIAINIAIAAVRRRIGLPYWSFSAWAKLQVKHA EEECCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VNFIGEFQRVVADEARRNNVDGVICGHIHHAIMEDMDGIRYINTGDWVESCTAIAENADG HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCC SFELITWMQTSEATAEHASDEMEPVNIPGLIGKHAA CEEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA