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The map label for this gene is sdpR [H]

Identifier: 159184845

GI number: 159184845

Start: 1614701

End: 1615015

Strand: Reverse

Name: sdpR [H]

Synonym: Atu1629

Alternate gene names: 159184845

Gene position: 1615015-1614701 (Counterclockwise)

Preceding gene: 159184846

Following gene: 15888941

Centisome position: 56.84

GC content: 60.63

Gene sequence:

>315_bases
ATGACAGAGAATGATATTTTCCGGGCGCTGGCTGATCCCACGCGCCGTGCCATTTTTGAGAAGCTGGCGGATGGCGCCAT
GAACGCTTCCGCCCTGCGTGAAGGGCTCGAGATCAGCCAGCCGGCCATGTCGCAGCATCTTTCGGTGCTGCGCGGGGCGG
GGCTCGTGGTGGAGAGGCGGCAGGGCCGTTTTGTCAATTACGAGGTTGATCCGGACGGGCTGACGCGTATCGCGGCATGG
CTCGGCAAATATCGCGCCTACTGGCCGCAGCGTATCGACGCACTCAAGCTCTTGCTGAAGGATATGGATCAATGA

Upstream 100 bases:

>100_bases
AGATAAAGCGTTCACCACAGCAGATGCTGGCGTGACGAAAAAAGCCGGCTTCAGCATCAGGGGGCTTGTGAATGACATAA
GTACGTGCTTATGTGTTGTC

Downstream 100 bases:

>100_bases
ACAGGCAGATACCCAAAGTGCCGGATGCCATCGAGCTTGAATATGATCTGGACGAGCCGCCGCAGAAGGTGTGGCGGGCG
ATCAGCATTCCCGCCTTTCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTENDIFRALADPTRRAIFEKLADGAMNASALREGLEISQPAMSQHLSVLRGAGLVVERRQGRFVNYEVDPDGLTRIAAW
LGKYRAYWPQRIDALKLLLKDMDQ

Sequences:

>Translated_104_residues
MTENDIFRALADPTRRAIFEKLADGAMNASALREGLEISQPAMSQHLSVLRGAGLVVERRQGRFVNYEVDPDGLTRIAAW
LGKYRAYWPQRIDALKLLLKDMDQ
>Mature_103_residues
TENDIFRALADPTRRAIFEKLADGAMNASALREGLEISQPAMSQHLSVLRGAGLVVERRQGRFVNYEVDPDGLTRIAAWL
GKYRAYWPQRIDALKLLLKDMDQ

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11789; Mature: 11658

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENDIFRALADPTRRAIFEKLADGAMNASALREGLEISQPAMSQHLSVLRGAGLVVERR
CCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECC
QGRFVNYEVDPDGLTRIAAWLGKYRAYWPQRIDALKLLLKDMDQ
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TENDIFRALADPTRRAIFEKLADGAMNASALREGLEISQPAMSQHLSVLRGAGLVVERR
CCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECC
QGRFVNYEVDPDGLTRIAAWLGKYRAYWPQRIDALKLLLKDMDQ
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]