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The map label for this gene is aglR [H]

Identifier: 159184798

GI number: 159184798

Start: 1511852

End: 1512871

Strand: Reverse

Name: aglR [H]

Synonym: Atu1522

Alternate gene names: 159184798

Gene position: 1512871-1511852 (Counterclockwise)

Preceding gene: 15888851

Following gene: 15888845

Centisome position: 53.24

GC content: 59.71

Gene sequence:

>1020_bases
ATGCCTTCGGCGATGGGCGGTCGCCCGACACTGAAGACCATTGCTTATATGACTGGCCTGGGCATCACCACGGTCTCTCG
CGCGCTGAAGGATGCGCCTGACATCGGCGCCGAGACCAAGGAGCGCGTGCGGCTGATCGCCCGGCAGATCGGCTACCAGC
CGAACCGCGCCGGCGTGCGGCTTCGTACCGGCAAGACCAATGTTATCGCACTGGTGCTGAGTGTCGACGAAGAGCTGATG
GGTTTCACCAGCCAGATGGTGTTCGGCATCACCGAGGTTCTCTCCACCACGCAATATCATCTCGTTGTCACGCCCCATAT
CCACGCCAAGGATTCCATGGTGCCGATCCGTTACATTCTCGAGACGGGTTCGGCGGATGGGGTGATCATTTCCAAGATCG
AGCCCAATGATCCGCGCGTCCGTTTCATGACCGAGCGCAACATGCCCTTCGTCACCCATGGGCGCTCGGATATGGGCATC
GAACATGCCTTCCACGATTTCGACAATGAGGCCTACGCCTATGAAGCGGTCGAGCGGCTGGCGCAATGCGGGCGCAAGAG
GATTGCCGTCATCGTGCCGCCGTCGCGCTTTTCGTTTCACGACCATGCCCGCAAGGGTTTCAATCGAGGGATAAGGGATT
TCGGACTCACCGAATTTCCAATCGACGCCGTCACCATCGAGACGCCACTCGAAAAAATCCGGGATTTCGGCCAGAGGCTG
ATGCAGTCTTCCGATCGGCCCGACGGCATCGTCTCTATCAGCGGCAGCAGTACCATTGCGCTGGTGGCAGGGTTCGAAGC
CGCCGGTGTGAAGATCGGCGAGGATGTCGATATCGTCTCGAAACAGTCCGCCGAATTCCTGAACTGGATCAAGCCGCAAA
TCCACACCGTCAACGAGGACATCAAGCTGGCGGGCAGGGAGCTTGCCAAGGCGTTGCTGGCCCGCATCAATGGTGAAGCT
GCTGAAACGCTGCAGAGCATCAGCGGGCCGGTCTGGTCGTCGATGGCGCCCAAGCCATAG

Upstream 100 bases:

>100_bases
ACCTTTGCCTTTGCAACGGAGCAAAAGCTATCTATGATTAGCGTTCGGTAAAGTGTGGCGAAATGACATGAACGATACTG
GCAAATCCGGCGGAGGCGAT

Downstream 100 bases:

>100_bases
GAAATCCGGCGCTGTTTCCGATCAGGACAGGCAGTTCTTGAGCGAACCGGCAATGCCGCGCATCAGCTTGAAATAAAGAT
CGGGGCCGGGCGTGAGTGTC

Product: LacI family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPSAMGGRPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIARQIGYQPNRAGVRLRTGKTNVIALVLSVDEELM
GFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGI
EHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRL
MQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIKLAGRELAKALLARINGEA
AETLQSISGPVWSSMAPKP

Sequences:

>Translated_339_residues
MPSAMGGRPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIARQIGYQPNRAGVRLRTGKTNVIALVLSVDEELM
GFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGI
EHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRL
MQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIKLAGRELAKALLARINGEA
AETLQSISGPVWSSMAPKP
>Mature_338_residues
PSAMGGRPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIARQIGYQPNRAGVRLRTGKTNVIALVLSVDEELMG
FTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGIE
HAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRLM
QSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIKLAGRELAKALLARINGEAA
ETLQSISGPVWSSMAPKP

Specific function: Probable regulatory protein for the binding-protein- dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=313, Percent_Identity=22.6837060702875, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37269; Mature: 37138

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAMGGRPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIARQIGYQPNRAGVR
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
LRTGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYIL
EEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHEE
ETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERL
ECCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHH
AQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRL
HHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHH
MQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNED
HHCCCCCCCEEEECCCCEEEEEECCHHCCEECCCCCCHHHHHHHHHHHHHCCHHEECCHH
IKLAGRELAKALLARINGEAAETLQSISGPVWSSMAPKP
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
PSAMGGRPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIARQIGYQPNRAGVR
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
LRTGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYIL
EEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHEE
ETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERL
ECCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHH
AQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRL
HHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHH
MQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNED
HHCCCCCCCEEEECCCCEEEEEECCHHCCEECCCCCCHHHHHHHHHHHHHCCHHEECCHH
IKLAGRELAKALLARINGEAAETLQSISGPVWSSMAPKP
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]