Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184774
Identifier: 159184774
GI number: 159184774
Start: 1473553
End: 1474173
Strand: Reverse
Name: 159184774
Synonym: Atu1482
Alternate gene names: NA
Gene position: 1474173-1473553 (Counterclockwise)
Preceding gene: 15888808
Following gene: 159184773
Centisome position: 51.88
GC content: 57.97
Gene sequence:
>621_bases ATGTGCAACCTTCTTCGGGTCCAATGGACCATTACACCACGAACGGCGCCCCAGCCCTGGCTTGCCTGCAACGGATGCGG TGATCTCAGGGCATTTCAGGCCAGCGACAAGATCCGCCTCAATGCCAACGGCCGTAAACTCGATGCCTGGCTCATCTACA GATGCCTGATCTGTGACAAAAGCTGGAACCGGCCAATCTTCGAGCGGCAGAATGTCTGCGACATAAGCCCGCCTGTTCTG GAGGCGCTGCAGTGCAACGATCCGCAATGGATAAGAGCCGAAACCTTCAACCTCGAGGCGTTGAGACGCAAGTCGCAGCG TATCGACGAGTTTCCGGACTTCGATATCGAGAAAAGGATACGGGACGAACCCACCGACTGGGCCGCGGCCGAGATCGATC TCACGGTTCCGTTTCCGGCTAGCATACGTCTCGATCGCCTGCTGGCTTCCGAACTGGGGCTTTCACGCTCAATGCTGCAG AAGCTTCATGATGGTGGCCAGATACGGGCGCAATCCGACCTTTTGCGGCGGCGTCTCAGGAACGGCACACGGATTGTAAT CGAGTGCGGCGACGGGCTTGATAGGGAGCGATTCTGGAAACCGGCGGTGAGAGGTCTCTGA
Upstream 100 bases:
>100_bases GTCTCCGCTCTTCGCCCACCCAGGACATCGCCACGCCGTACCCGCAAGGGTTTTCTCCTGCACCATCTTGGTGGACTTCC AAACGGAAGACCAAGACACC
Downstream 100 bases:
>100_bases GGGTAGCGCGAGGGTCTGTAGGTTCAGGCCCTCGCCTGCTCATCGAGCGGTTCAGCCATGCGCTGGAAGAGACCTTTTTC TATTTCATCGGGCTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MCNLLRVQWTITPRTAPQPWLACNGCGDLRAFQASDKIRLNANGRKLDAWLIYRCLICDKSWNRPIFERQNVCDISPPVL EALQCNDPQWIRAETFNLEALRRKSQRIDEFPDFDIEKRIRDEPTDWAAAEIDLTVPFPASIRLDRLLASELGLSRSMLQ KLHDGGQIRAQSDLLRRRLRNGTRIVIECGDGLDRERFWKPAVRGL
Sequences:
>Translated_206_residues MCNLLRVQWTITPRTAPQPWLACNGCGDLRAFQASDKIRLNANGRKLDAWLIYRCLICDKSWNRPIFERQNVCDISPPVL EALQCNDPQWIRAETFNLEALRRKSQRIDEFPDFDIEKRIRDEPTDWAAAEIDLTVPFPASIRLDRLLASELGLSRSMLQ KLHDGGQIRAQSDLLRRRLRNGTRIVIECGDGLDRERFWKPAVRGL >Mature_206_residues MCNLLRVQWTITPRTAPQPWLACNGCGDLRAFQASDKIRLNANGRKLDAWLIYRCLICDKSWNRPIFERQNVCDISPPVL EALQCNDPQWIRAETFNLEALRRKSQRIDEFPDFDIEKRIRDEPTDWAAAEIDLTVPFPASIRLDRLLASELGLSRSMLQ KLHDGGQIRAQSDLLRRRLRNGTRIVIECGDGLDRERFWKPAVRGL
Specific function: Unknown
COG id: COG4332
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23869; Mature: 23869
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLLRVQWTITPRTAPQPWLACNGCGDLRAFQASDKIRLNANGRKLDAWLIYRCLICDK CCCEEEEEEEECCCCCCCCCEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHCCC SWNRPIFERQNVCDISPPVLEALQCNDPQWIRAETFNLEALRRKSQRIDEFPDFDIEKRI CCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHH RDEPTDWAAAEIDLTVPFPASIRLDRLLASELGLSRSMLQKLHDGGQIRAQSDLLRRRLR CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHC NGTRIVIECGDGLDRERFWKPAVRGL CCCEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MCNLLRVQWTITPRTAPQPWLACNGCGDLRAFQASDKIRLNANGRKLDAWLIYRCLICDK CCCEEEEEEEECCCCCCCCCEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHCCC SWNRPIFERQNVCDISPPVLEALQCNDPQWIRAETFNLEALRRKSQRIDEFPDFDIEKRI CCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHH RDEPTDWAAAEIDLTVPFPASIRLDRLLASELGLSRSMLQKLHDGGQIRAQSDLLRRRLR CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHC NGTRIVIECGDGLDRERFWKPAVRGL CCCEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA