Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184773

Identifier: 159184773

GI number: 159184773

Start: 1472907

End: 1473401

Strand: Reverse

Name: 159184773

Synonym: Atu1481

Alternate gene names: NA

Gene position: 1473401-1472907 (Counterclockwise)

Preceding gene: 159184774

Following gene: 15888804

Centisome position: 51.85

GC content: 58.79

Gene sequence:

>495_bases
ATGAAAAGCTCATCTTATATCGCACAGGTAGCTATTGCGGCGATGTTTGCCTCAACCCAATCAGCCAGTGCGGGGCCTGA
AGATCACCATTGGTCGAAGGATCCGGCGAGCCATTGCGCATTCGTCGTGCCGGCTTCGATGACCGAGGGGCCGGCCTTCT
GGACAGGCGCTTGTGTCGACGGAAAGGCGTCCGGAATCGGCATGCTCCGTCGCCGGGATGGCGGTCGCGCCGGGGCTGCT
TTCCTTGGTAAAATGAGGAATGGTCTTCCTGAGATCGGTGTCGTCGATCTGGACGACGGGTATCGGGCGGGCAAGTTCAG
CGACGGCGATATTGGTGGCGAGGCCGAGCTTGAGCCTCAGCTGCGGATAGATGCGTTTCGTATTGCAGCAGACGCCGCAA
GGCAGGTTAGCGCCAAATACGCGGCAGAGAAGAATGAAGCCTCCGCTCAGCTCTATGGCACCATGGCGGAAACCCTTGAA
GCTCAGATCGAATAG

Upstream 100 bases:

>100_bases
TCAGCCATGCGCTGGAAGAGACCTTTTTCTATTTCATCGGGCTTGCGGAACGAAGAGGAATGGTAAAAAAATCGGCCGTC
TAACGAGGGTATTCGGCGGA

Downstream 100 bases:

>100_bases
GTACCCCTGCACGGTGATGTCATCGACAGGCGCTGAAAAGCTCTGGCCATTTCAGGCAAAAACCTTAAGCTCCTGCGCCG
GACACAAATTGCAGAGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA
FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE
AQIE

Sequences:

>Translated_164_residues
MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA
FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE
AQIE
>Mature_164_residues
MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA
FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE
AQIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17201; Mature: 17201

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCEEEEEECC
GKASGIGMLRRRDGGRAGAAFLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQ
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
LRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLEAQIE
EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCEEEEEECC
GKASGIGMLRRRDGGRAGAAFLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQ
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
LRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLEAQIE
EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA