Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184773
Identifier: 159184773
GI number: 159184773
Start: 1472907
End: 1473401
Strand: Reverse
Name: 159184773
Synonym: Atu1481
Alternate gene names: NA
Gene position: 1473401-1472907 (Counterclockwise)
Preceding gene: 159184774
Following gene: 15888804
Centisome position: 51.85
GC content: 58.79
Gene sequence:
>495_bases ATGAAAAGCTCATCTTATATCGCACAGGTAGCTATTGCGGCGATGTTTGCCTCAACCCAATCAGCCAGTGCGGGGCCTGA AGATCACCATTGGTCGAAGGATCCGGCGAGCCATTGCGCATTCGTCGTGCCGGCTTCGATGACCGAGGGGCCGGCCTTCT GGACAGGCGCTTGTGTCGACGGAAAGGCGTCCGGAATCGGCATGCTCCGTCGCCGGGATGGCGGTCGCGCCGGGGCTGCT TTCCTTGGTAAAATGAGGAATGGTCTTCCTGAGATCGGTGTCGTCGATCTGGACGACGGGTATCGGGCGGGCAAGTTCAG CGACGGCGATATTGGTGGCGAGGCCGAGCTTGAGCCTCAGCTGCGGATAGATGCGTTTCGTATTGCAGCAGACGCCGCAA GGCAGGTTAGCGCCAAATACGCGGCAGAGAAGAATGAAGCCTCCGCTCAGCTCTATGGCACCATGGCGGAAACCCTTGAA GCTCAGATCGAATAG
Upstream 100 bases:
>100_bases TCAGCCATGCGCTGGAAGAGACCTTTTTCTATTTCATCGGGCTTGCGGAACGAAGAGGAATGGTAAAAAAATCGGCCGTC TAACGAGGGTATTCGGCGGA
Downstream 100 bases:
>100_bases GTACCCCTGCACGGTGATGTCATCGACAGGCGCTGAAAAGCTCTGGCCATTTCAGGCAAAAACCTTAAGCTCCTGCGCCG GACACAAATTGCAGAGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE AQIE
Sequences:
>Translated_164_residues MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE AQIE >Mature_164_residues MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVDGKASGIGMLRRRDGGRAGAA FLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQLRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLE AQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17201; Mature: 17201
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCEEEEEECC GKASGIGMLRRRDGGRAGAAFLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQ CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC LRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLEAQIE EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSSSYIAQVAIAAMFASTQSASAGPEDHHWSKDPASHCAFVVPASMTEGPAFWTGACVD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCEEEEEECC GKASGIGMLRRRDGGRAGAAFLGKMRNGLPEIGVVDLDDGYRAGKFSDGDIGGEAELEPQ CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC LRIDAFRIAADAARQVSAKYAAEKNEASAQLYGTMAETLEAQIE EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA