Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184768
Identifier: 159184768
GI number: 159184768
Start: 1454869
End: 1456146
Strand: Reverse
Name: 159184768
Synonym: Atu1459
Alternate gene names: NA
Gene position: 1456146-1454869 (Counterclockwise)
Preceding gene: 15888787
Following gene: 159184765
Centisome position: 51.24
GC content: 60.49
Gene sequence:
>1278_bases ATGACGACTATCGGCGTTTCGGCACCGCATGGCGGCCTTCCTTCCGGTGGATTGCCGCGCAGCGGCGGCATCTCAGACCG CACGCTTTTTGCCCTTGCAGCGCTGAATTTTTTCCTCGCCGATGCCCGTGACGGCCTCGGGCCGTTTCTGGATGCATTTC TGGCGACACAGGGCTGGTCTTCGCTTTCGCTGGGCATGATCGCCACGGTCGGCGGCCTCGTCGGCCTGCTTGCGACGCCA CTATGCGGTGCGCTGGTGGATGGCACGACGTGGAAGAGGATGCTGATTGCCATCCCCGTCGTTCTCGTGACCATCGGTGC GCTGATCACGCTGATTTTTCCGGATGCGTGGATCGTCTGGACCGGACAGATCATGACGGCTGTGGTCGGCGCCGTGGTCG GTCCTGCACTTGCCGGCCTCACACTCGGCCTGGTTGGCGAGCGCCTGTTTTCCAACCAGATTTCACGCAACGAATTCTGG AACCATGGCGGTAATTTCGCGTCGCTTTTCGCGACTTATGTGGTCGTCACCTTCTTCGGCATGAACGGGATCATCGGCCT GATGCTGCTGACCGCTGCCGGCGCCCTGGTCGCAACGGCGGCCATTGATCCTGCAAGGATAGACCACAAGGTTGCGCGTG GCCTTGCCGAAGACAAGGGAGAGCCCGGGCCATCCGGCATCAACGTGTTGCTGCACGAGCGAGGTCTGATCTTTCTCGCC ATCATCCTGCTTGTCTTCCACTTCGGCAACGCGCCGATGGGCCGATTGATCGCGCAGGATTTCGCCATCGAACTGCAAAC GCCCTTCCGCACCACAGCCATCATCACCGGTGTCGCACAGTTCGCCATGATTTTCGTCGCCGCCATGGCACCCTGGCTGA TACGCCGTTTCGGTCTTTCGACCGTGTTTATCGTTGCGCTCGCCGCCCTGCCAATACGCGGTCTTCTCGCCTCGGCCTTT ACGGATTTCTGGGTCATCTTTCCGGTACAGTTTCTTGACGGCGTTGGCGCCGGCCTGCTCGGCATCGTCACGCCCGTCGC GGTGGAAAGAATCCTGAAGGGCACCGGCCGTTTTAATGTCGGCCTTGCCAGCGTCATGATGGTCCAGGGCATTGGTGCAT CACTCAGCAATGTCGTTGCAGGCTGGCTGGTGACGAAGGGCGGTTATTCGCTGTCGCATCTTGTCGGCGGCGGCATCGCG GCGATCGCCATCGGACTTTTCCTACTCTATCGCAACGAAATCGCGCCGAAACAGGATGATGATGGCGCTTCTCGATAG
Upstream 100 bases:
>100_bases GTTTATGTCGTGCCTATGCAACCAAACGCGGGCACAGATGTTTCTCGCCAGCCTCGATCGATTTCCCATTCCCTTCTGCA TATTTTTCGGAGCATATTTC
Downstream 100 bases:
>100_bases CGGCATGTTGAAGTGCGCAAACAAAAAGGAGGCCTGACGGCCTCCTGAAATCTTGTAGTCTGTCAGGCGTTCAGCCGACG AAAGCGCGTTCGATCACGAA
Product: MFS permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTTIGVSAPHGGLPSGGLPRSGGISDRTLFALAALNFFLADARDGLGPFLDAFLATQGWSSLSLGMIATVGGLVGLLATP LCGALVDGTTWKRMLIAIPVVLVTIGALITLIFPDAWIVWTGQIMTAVVGAVVGPALAGLTLGLVGERLFSNQISRNEFW NHGGNFASLFATYVVVTFFGMNGIIGLMLLTAAGALVATAAIDPARIDHKVARGLAEDKGEPGPSGINVLLHERGLIFLA IILLVFHFGNAPMGRLIAQDFAIELQTPFRTTAIITGVAQFAMIFVAAMAPWLIRRFGLSTVFIVALAALPIRGLLASAF TDFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNVGLASVMMVQGIGASLSNVVAGWLVTKGGYSLSHLVGGGIA AIAIGLFLLYRNEIAPKQDDDGASR
Sequences:
>Translated_425_residues MTTIGVSAPHGGLPSGGLPRSGGISDRTLFALAALNFFLADARDGLGPFLDAFLATQGWSSLSLGMIATVGGLVGLLATP LCGALVDGTTWKRMLIAIPVVLVTIGALITLIFPDAWIVWTGQIMTAVVGAVVGPALAGLTLGLVGERLFSNQISRNEFW NHGGNFASLFATYVVVTFFGMNGIIGLMLLTAAGALVATAAIDPARIDHKVARGLAEDKGEPGPSGINVLLHERGLIFLA IILLVFHFGNAPMGRLIAQDFAIELQTPFRTTAIITGVAQFAMIFVAAMAPWLIRRFGLSTVFIVALAALPIRGLLASAF TDFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNVGLASVMMVQGIGASLSNVVAGWLVTKGGYSLSHLVGGGIA AIAIGLFLLYRNEIAPKQDDDGASR >Mature_424_residues TTIGVSAPHGGLPSGGLPRSGGISDRTLFALAALNFFLADARDGLGPFLDAFLATQGWSSLSLGMIATVGGLVGLLATPL CGALVDGTTWKRMLIAIPVVLVTIGALITLIFPDAWIVWTGQIMTAVVGAVVGPALAGLTLGLVGERLFSNQISRNEFWN HGGNFASLFATYVVVTFFGMNGIIGLMLLTAAGALVATAAIDPARIDHKVARGLAEDKGEPGPSGINVLLHERGLIFLAI ILLVFHFGNAPMGRLIAQDFAIELQTPFRTTAIITGVAQFAMIFVAAMAPWLIRRFGLSTVFIVALAALPIRGLLASAFT DFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNVGLASVMMVQGIGASLSNVVAGWLVTKGGYSLSHLVGGGIAA IAIGLFLLYRNEIAPKQDDDGASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44232; Mature: 44101
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIGVSAPHGGLPSGGLPRSGGISDRTLFALAALNFFLADARDGLGPFLDAFLATQGWS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC SLSLGMIATVGGLVGLLATPLCGALVDGTTWKRMLIAIPVVLVTIGALITLIFPDAWIVW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TGQIMTAVVGAVVGPALAGLTLGLVGERLFSNQISRNEFWNHGGNFASLFATYVVVTFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MNGIIGLMLLTAAGALVATAAIDPARIDHKVARGLAEDKGEPGPSGINVLLHERGLIFLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCHHHHH IILLVFHFGNAPMGRLIAQDFAIELQTPFRTTAIITGVAQFAMIFVAAMAPWLIRRFGLS HHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFIVALAALPIRGLLASAFTDFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH GLASVMMVQGIGASLSNVVAGWLVTKGGYSLSHLVGGGIAAIAIGLFLLYRNEIAPKQDD HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC DGASR CCCCC >Mature Secondary Structure TTIGVSAPHGGLPSGGLPRSGGISDRTLFALAALNFFLADARDGLGPFLDAFLATQGWS CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC SLSLGMIATVGGLVGLLATPLCGALVDGTTWKRMLIAIPVVLVTIGALITLIFPDAWIVW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TGQIMTAVVGAVVGPALAGLTLGLVGERLFSNQISRNEFWNHGGNFASLFATYVVVTFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MNGIIGLMLLTAAGALVATAAIDPARIDHKVARGLAEDKGEPGPSGINVLLHERGLIFLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCHHHHH IILLVFHFGNAPMGRLIAQDFAIELQTPFRTTAIITGVAQFAMIFVAAMAPWLIRRFGLS HHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFIVALAALPIRGLLASAFTDFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH GLASVMMVQGIGASLSNVVAGWLVTKGGYSLSHLVGGGIAAIAIGLFLLYRNEIAPKQDD HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC DGASR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]