BacMap

Definition	Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession	NC_003062
Length	2,841,580

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The map label for this gene is fabG [H]

Identifier: 159184718

GI number: 159184718

Start: 1322983

End: 1323687

Strand: Direct

Name: fabG [H]

Synonym: Atu1338

Alternate gene names: 159184718

Gene position: 1322983-1323687 (Clockwise)

Preceding gene: 15888662

Following gene: 159184720

Centisome position: 46.56

GC content: 61.7

Gene sequence:

>705_bases
ATGTCGGCAGAAAAAGTGGCTATTGTAACGGCAGGTGGCAGCGGCATGGGGGCGGCCGTGGCGAAACGCCTGGCGGCGGA
CGGTTACAGGCTCGCGATCCTGTCCTCCTCCGGCAAGGGCGAGGCGCTGGCGAAGGAACTGGGCGGTATCGGTGTCACCG
GCTCCAACCAGTCCAATGACGACCTCCAGCGACTGACGGATCAGACGCTCGAGAAATTCGGTCGCATCGACGTGCTGGTC
AATAGCGCCGGGCATGGCCCACGTGCCTCCATTCTCGATATTACCGACGAGCAATGGCACACCGGTCTCGATGTCTACCT
GATGAACGTCATCCGCCCAACGCGGATCGTCGCGCCCATCATGGTGAAGCAGAAGGCCGGTGCGATCGTCAACATCTCGA
CGGCCTGGGCTTTCGAACCGAGCAGCATGTTCCCGACATCGGCAGTGTTCCGGGCCGGCCTTGCCTCCTACAGCAAGATT
TTCGCCGATACCTATGCGGCCGACAATGTGCGCATGAACAATGTCCTGCCCGGCTGGATCGACAGCCTGCCGGCTACGGA
AGAACGCCGCGACAGCGTGCCGATGCAGCGCTACGGCAAGAGCGAGGAAATCGCTGCCACCGTGGCGTTTCTCGCGTCCG
AAGGGGCAGGGTATATTACCGGGCAGAATATCCGGGTTGATGGTGGGCTGACGCGGTCTGTTTGA

Upstream 100 bases:

>100_bases
CCGCTGTAAGGCTTTCTGGTTCGAACTCGTCTTTGAAACCCGTTATAGATGGGTCAATGTGGTGCAGGACCACCCGTCGG
ACTGGATAGGGAGAAGAGCG

Downstream 100 bases:

>100_bases
CGGGCGGTTATATCGACCCTCTTTCCTGTGACATCGTCTGGCGCTCCAGCATCGACAAAACAAAACGCCCGCAACGATGT
TGCGGGCGTTTTGTTTATTC

Product: 3-oxoacyl-(acyl carrier protein) reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSAEKVAIVTAGGSGMGAAVAKRLAADGYRLAILSSSGKGEALAKELGGIGVTGSNQSNDDLQRLTDQTLEKFGRIDVLV
NSAGHGPRASILDITDEQWHTGLDVYLMNVIRPTRIVAPIMVKQKAGAIVNISTAWAFEPSSMFPTSAVFRAGLASYSKI
FADTYAADNVRMNNVLPGWIDSLPATEERRDSVPMQRYGKSEEIAATVAFLASEGAGYITGQNIRVDGGLTRSV

Sequences:

>Translated_234_residues
MSAEKVAIVTAGGSGMGAAVAKRLAADGYRLAILSSSGKGEALAKELGGIGVTGSNQSNDDLQRLTDQTLEKFGRIDVLV
NSAGHGPRASILDITDEQWHTGLDVYLMNVIRPTRIVAPIMVKQKAGAIVNISTAWAFEPSSMFPTSAVFRAGLASYSKI
FADTYAADNVRMNNVLPGWIDSLPATEERRDSVPMQRYGKSEEIAATVAFLASEGAGYITGQNIRVDGGLTRSV
>Mature_233_residues
SAEKVAIVTAGGSGMGAAVAKRLAADGYRLAILSSSGKGEALAKELGGIGVTGSNQSNDDLQRLTDQTLEKFGRIDVLVN
SAGHGPRASILDITDEQWHTGLDVYLMNVIRPTRIVAPIMVKQKAGAIVNISTAWAFEPSSMFPTSAVFRAGLASYSKIF
ADTYAADNVRMNNVLPGWIDSLPATEERRDSVPMQRYGKSEEIAATVAFLASEGAGYITGQNIRVDGGLTRSV

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=34.8360655737705, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI40254992, Length=234, Percent_Identity=29.0598290598291, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=30.078125, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=31.8548387096774, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=29.3877551020408, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=31.4741035856574, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI126723191, Length=176, Percent_Identity=33.5227272727273, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=26.4227642276423, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI66933014, Length=182, Percent_Identity=26.9230769230769, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=31.2169312169312, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI59889578, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=25.1063829787234, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4758504, Length=248, Percent_Identity=29.4354838709677, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=29.6296296296296, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=31.3559322033898, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=32.6530612244898, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87082100, Length=248, Percent_Identity=29.8387096774194, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789208, Length=239, Percent_Identity=27.1966527196653, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=27.5, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=27.5, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=21.4574898785425, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=26.9076305220884, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=246, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=29.6296296296296, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=32.1428571428571, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=34.1463414634146, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=31.4393939393939, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=28.4, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=29.4605809128631, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=31.6602316602317, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.4809160305344, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=29.6296296296296, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=30.6513409961686, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=28.6792452830189, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=30.0380228136882, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=29.6296296296296, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=246, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=30.1115241635688, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=29.6153846153846, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=29.4776119402985, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=28.0898876404494, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=26.6129032258064, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=26.4150943396226, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=25, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=25.5208333333333, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6324126, Length=245, Percent_Identity=23.265306122449, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=36.3265306122449, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=32.6530612244898, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=31.6872427983539, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=30.3643724696356, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=31.7073170731707, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=31.3253012048193, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24766; Mature: 24635

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEKVAIVTAGGSGMGAAVAKRLAADGYRLAILSSSGKGEALAKELGGIGVTGSNQSND
CCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCH
DLQRLTDQTLEKFGRIDVLVNSAGHGPRASILDITDEQWHTGLDVYLMNVIRPTRIVAPI
HHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCHHHHCCHHHHHHHHHCHHHHHHHH
MVKQKAGAIVNISTAWAFEPSSMFPTSAVFRAGLASYSKIFADTYAADNVRMNNVLPGWI
HHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH
DSLPATEERRDSVPMQRYGKSEEIAATVAFLASEGAGYITGQNIRVDGGLTRSV
HCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCC
>Mature Secondary Structure 
SAEKVAIVTAGGSGMGAAVAKRLAADGYRLAILSSSGKGEALAKELGGIGVTGSNQSND
CCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCH
DLQRLTDQTLEKFGRIDVLVNSAGHGPRASILDITDEQWHTGLDVYLMNVIRPTRIVAPI
HHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCHHHHCCHHHHHHHHHCHHHHHHHH
MVKQKAGAIVNISTAWAFEPSSMFPTSAVFRAGLASYSKIFADTYAADNVRMNNVLPGWI
HHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH
DSLPATEERRDSVPMQRYGKSEEIAATVAFLASEGAGYITGQNIRVDGGLTRSV
HCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]