Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184705
Identifier: 159184705
GI number: 159184705
Start: 1304715
End: 1305011
Strand: Direct
Name: 159184705
Synonym: Atu1312
Alternate gene names: NA
Gene position: 1304715-1305011 (Clockwise)
Preceding gene: 159184704
Following gene: 15888638
Centisome position: 45.92
GC content: 53.87
Gene sequence:
>297_bases ATGCCAACGCGTAACGTCGTCCTGACACAGCATCACGAAGAGATCATAGACGATCTCGTCAAATCCGGCCGCTATCAAAA CGCCAGTGAAGTGCTGCGTGAAGGCTTACGGTTAATTGAGAGGCGAGAGCGTCTTGAGGCAACCAGACTGGAAACCCTGA AGGTCGCGGCGCAACAGGGCTTCTGCGACCTTGACCAGGGACGTTATATCGATGTTTCGGATGATGCCCTTGACGATTTC ATTTCCGCTTTCGGGCGCGAGGCTGAAGTGCGCCTGACCAAGTCCGATGACAAATGA
Upstream 100 bases:
>100_bases GCCTGGCAGCGTCTGGTTTGGCATGGCTTTGGAGTGATATTGGCAGATTATGCCAATCGGTGCTATTGCTAGGCGTAAAT GAAGTCTGGTGGAGGCCCCG
Downstream 100 bases:
>100_bases CGACGTATCGTCTGTCCGATGCCGCACAATCGGACATCATTGAAATTCTTGGATGGACACACGCGACGTTTGGAGCTGCA GCGAGAAAACGCTACGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPTRNVVLTQHHEEIIDDLVKSGRYQNASEVLREGLRLIERRERLEATRLETLKVAAQQGFCDLDQGRYIDVSDDALDDF ISAFGREAEVRLTKSDDK
Sequences:
>Translated_98_residues MPTRNVVLTQHHEEIIDDLVKSGRYQNASEVLREGLRLIERRERLEATRLETLKVAAQQGFCDLDQGRYIDVSDDALDDF ISAFGREAEVRLTKSDDK >Mature_97_residues PTRNVVLTQHHEEIIDDLVKSGRYQNASEVLREGLRLIERRERLEATRLETLKVAAQQGFCDLDQGRYIDVSDDALDDFI SAFGREAEVRLTKSDDK
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11277; Mature: 11146
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRNVVLTQHHEEIIDDLVKSGRYQNASEVLREGLRLIERRERLEATRLETLKVAAQQG CCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCDLDQGRYIDVSDDALDDFISAFGREAEVRLTKSDDK CCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure PTRNVVLTQHHEEIIDDLVKSGRYQNASEVLREGLRLIERRERLEATRLETLKVAAQQG CCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCDLDQGRYIDVSDDALDDFISAFGREAEVRLTKSDDK CCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA