Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888638
Identifier: 15888638
GI number: 15888638
Start: 1305008
End: 1305382
Strand: Direct
Name: 15888638
Synonym: Atu8154
Alternate gene names: NA
Gene position: 1305008-1305382 (Clockwise)
Preceding gene: 159184705
Following gene: 159184706
Centisome position: 45.93
GC content: 52.27
Gene sequence:
>375_bases ATGACGACGTATCGTCTGTCCGATGCCGCACAATCGGACATCATTGAAATTCTTGGATGGACACACGCGACGTTTGGAGC TGCAGCGAGAAAACGCTACGAAAAGTTGCTTGCAACTGCGTTGCGTGATGTTGCTGTTGATCCGCTACGCGCCGGCACGA ATATTCGCGCTGAACTTGGTGAAGACGTGCGTAGCTACCACCTGCGTTATAGTCGCGAGCGGGCAAAAAGCGAAACGGGC CTCGTTAAAAATCCGAGGCATCTGTTACTCTATCGTGCACTACGACCCGGTTTGGTGGGTGTCGGCCGCGTTCTTCACGA TTCGATGGAAATCGAGCGCCATCTTCCGGACGATTATGGTGATATTACTTTCTGA
Upstream 100 bases:
>100_bases ACCAGGGACGTTATATCGATGTTTCGGATGATGCCCTTGACGATTTCATTTCCGCTTTCGGGCGCGAGGCTGAAGTGCGC CTGACCAAGTCCGATGACAA
Downstream 100 bases:
>100_bases GAAGGTCTGGAGGCGTCCCTGTTGCGTATTGAAAAAGGTGTGGCGGGCCCGTCATCCACAGGAACCTTCTCACCATCCAC CCACCCACATTGTTCTTCCC
Product: plasmid stabilization system protein protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein Protein; Plasmid Stabilization System Protein; Plasmid Stablization Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTTYRLSDAAQSDIIEILGWTHATFGAAARKRYEKLLATALRDVAVDPLRAGTNIRAELGEDVRSYHLRYSRERAKSETG LVKNPRHLLLYRALRPGLVGVGRVLHDSMEIERHLPDDYGDITF
Sequences:
>Translated_124_residues MTTYRLSDAAQSDIIEILGWTHATFGAAARKRYEKLLATALRDVAVDPLRAGTNIRAELGEDVRSYHLRYSRERAKSETG LVKNPRHLLLYRALRPGLVGVGRVLHDSMEIERHLPDDYGDITF >Mature_123_residues TTYRLSDAAQSDIIEILGWTHATFGAAARKRYEKLLATALRDVAVDPLRAGTNIRAELGEDVRSYHLRYSRERAKSETGL VKNPRHLLLYRALRPGLVGVGRVLHDSMEIERHLPDDYGDITF
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14047; Mature: 13916
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYRLSDAAQSDIIEILGWTHATFGAAARKRYEKLLATALRDVAVDPLRAGTNIRAELG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHH EDVRSYHLRYSRERAKSETGLVKNPRHLLLYRALRPGLVGVGRVLHDSMEIERHLPDDYG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DITF CCCC >Mature Secondary Structure TTYRLSDAAQSDIIEILGWTHATFGAAARKRYEKLLATALRDVAVDPLRAGTNIRAELG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHH EDVRSYHLRYSRERAKSETGLVKNPRHLLLYRALRPGLVGVGRVLHDSMEIERHLPDDYG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DITF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA