Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is plsY [H]
Identifier: 159184702
GI number: 159184702
Start: 1298331
End: 1298939
Strand: Reverse
Name: plsY [H]
Synonym: Atu1306
Alternate gene names: 159184702
Gene position: 1298939-1298331 (Counterclockwise)
Preceding gene: 15888632
Following gene: 15888630
Centisome position: 45.71
GC content: 63.71
Gene sequence:
>609_bases TTGACTGACTGGCAGACGGCGCCTGCCCTTCTCGCGCTGGCAGCGCTGATCGGCTATCTGCTTGGCTCCATCCCCTTCGG CCTCATCCTCACCCGCATGGCGGGGCTGGGCGACGTGCGCAAGATCGGTTCGGGCAATATCGGCGCCACCAATGTGCTGC GCACCGGCAACAAGAAACTCGCCGCCGCGACCCTGCTCCTCGACGCACTCAAGGGCACGGCGGCGGTTCTGGTCGCCAAT GCGCTCTGGGGTTACGAGGCCTCGCTGGTCGCGGGTTTCTTTGCCTTTCTCGGCCACCTGTTTCCGGTGTGGCTCGGCTT CAAGGGCGGCAAGGGCGTCGCCGTCTATATCGGCGTCCTGCTTGGCGCGGCACCGCTGATGATGCTGGCCTTCGCGCTGA TCTGGCTCGCAACCGCGTTCATCACCCGCTACTCCTCGCTGTCGGCGCTGCTGGCCATGCTGATCATTCCCGTCGCGCTC TGGGTGCTCGGACCTGAAAAGACGGCGATGCTGGTGACGCTGCTCAGCGTGATTTCCTGGTGGAAACATCGCGAAAATAT CAGGCGTCTTATGGCCGGCACCGAAAGCAGGATCGGTCAAAAGGGCTGA
Upstream 100 bases:
>100_bases GGCCACTTATGTGGCTGGCAAAGCCGTTCATTCCTTGGCATAAGATCACGGCAAGAGATCACGCGGACGGCGCGACAGAG GGGACATTTCAATGAGTGCT
Downstream 100 bases:
>100_bases ACCCCATCTTGAGGATATGCCATGCCGCATGAGGAAACGACACGGCAGGGCATAGAGCTTTCCGCGCGGCAGCGGGTCGC ATGGCTGAGGCTCATTCGCA
Product: putative glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTDWQTAPALLALAALIGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKLAAATLLLDALKGTAAVLVAN ALWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVLLGAAPLMMLAFALIWLATAFITRYSSLSALLAMLIIPVAL WVLGPEKTAMLVTLLSVISWWKHRENIRRLMAGTESRIGQKG
Sequences:
>Translated_202_residues MTDWQTAPALLALAALIGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKLAAATLLLDALKGTAAVLVAN ALWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVLLGAAPLMMLAFALIWLATAFITRYSSLSALLAMLIIPVAL WVLGPEKTAMLVTLLSVISWWKHRENIRRLMAGTESRIGQKG >Mature_201_residues TDWQTAPALLALAALIGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKLAAATLLLDALKGTAAVLVANA LWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVLLGAAPLMMLAFALIWLATAFITRYSSLSALLAMLIIPVALW VLGPEKTAMLVTLLSVISWWKHRENIRRLMAGTESRIGQKG
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
Organism=Escherichia coli, GI1789439, Length=193, Percent_Identity=40.9326424870466, Blast_Score=118, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 21407; Mature: 21276
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDWQTAPALLALAALIGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCHHH AAATLLLDALKGTAAVLVANALWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGAAPLMMLAFALIWLATAFITRYSSLSALLAMLIIPVALWVLGPEKTAMLVTLLSVISW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH WKHRENIRRLMAGTESRIGQKG HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDWQTAPALLALAALIGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCHHH AAATLLLDALKGTAAVLVANALWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGAAPLMMLAFALIWLATAFITRYSSLSALLAMLIIPVALWVLGPEKTAMLVTLLSVISW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH WKHRENIRRLMAGTESRIGQKG HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]