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The map label for this gene is smf [H]

Identifier: 15888630

GI number: 15888630

Start: 1297167

End: 1298309

Strand: Reverse

Name: smf [H]

Synonym: Atu1305

Alternate gene names: 15888630

Gene position: 1298309-1297167 (Counterclockwise)

Preceding gene: 159184702

Following gene: 15888629

Centisome position: 45.69

GC content: 64.13

Gene sequence:

>1143_bases
ATGCCGCATGAGGAAACGACACGGCAGGGCATAGAGCTTTCCGCGCGGCAGCGGGTCGCATGGCTGAGGCTCATTCGCAG
CGACAATATCGGCCCCGTTACCTTCCGCGAACTCATCAATCATTTCGGCAGCGCCGAAAAGGCGCTGGATGCCCTGCCCG
AGCTTTCAAAGCACGGCGGCTCTTCGCGCCGCTTGCGGATCGCCACGCCGTCGGAGGCGGAAGGTGAAATCGAAACGGCC
GAAAAATTCGGTGCGCGTTTCATCGGTATCGGCGAACCGGATTATCCGCCTGCCCTGCGGCAGATGGATGGCGCGCCGCC
GCTGATCGCCATGAAGGGATCGGCGGATGCGGCGACAAGAGCCTGCGTCGGCATCGTCGGTTCGCGCAACGCGTCCATCA
ACGGCGCGAAATTCGCCGCCATGCTGGCACGCGACTGTGGGCGTGCCGGTTATTCAATCGCATCAGGACTGGCGCGCGGC
ATCGATGCGGCCGCGCACCGGGCAAGCCTTGCAACCGGCACGGTGGCGATGCTGGCCGGCGGTCTCGACCGCCCCTACCC
GCAGGAAAATTTCGGGCTTTTGCAGGACATATACGATCAGGGCGGCGCGACGATCAGCGAAATGCCCTTTGGCTGGGAAC
CGCGCGCCCGCGATTTCCCGCGCCGCAACCGGTTGATCGCGGGCGTTTCGCTCGGCGTCGTCATCGTGGAGGCGGCAGAG
CGTTCGGGTTCGCTGATTACGGCGCGGCTTGCCGGCGAAGCGGGTCGTCTGGTTTTTGCCGTGCCCGGCTCCCCGCTCGA
TGCACGCTGCGAAGGTACCAACCGGCTGATCAAGGAAGGCGCCATGCTGACCACGGGCGCTGCCGATATTCTCGAAGCAC
TGCGACCACTGATGGAGCCGCAATTGCCCTATGACTGCAAGATCGAGGAACCGCGCTCCGACGAAGAAATGTCACCGCCC
GGAGATGATGAGCGCAGCGTCATCGCTTCCGCACTCGGCCCCTCGCCCGTCGAGATTGACGACATCATCCGCCATACGGG
CTTTTCCGCGGCCGCGGTTCATCTGGTACTGCTGGAGCTCGATATAGCCGGGCGTCTAAACCGGCATGCCGGGGGGCGTG
TTTCGCTGTTCGTCGCGGATTGA

Upstream 100 bases:

>100_bases
GATTTCCTGGTGGAAACATCGCGAAAATATCAGGCGTCTTATGGCCGGCACCGAAAGCAGGATCGGTCAAAAGGGCTGAA
CCCCATCTTGAGGATATGCC

Downstream 100 bases:

>100_bases
CAGTTTGCGTCGCCCGCTCTGGATATCGCCGACTTCGACATAGGCCATCTCGATCAGGTAACATAGCATGTCGGCGCCCT
CGCGGCTGGCGACCTGGCGC

Product: DNA processing chain A

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPHEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDALPELSKHGGSSRRLRIATPSEAEGEIETA
EKFGARFIGIGEPDYPPALRQMDGAPPLIAMKGSADAATRACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARG
IDAAAHRASLATGTVAMLAGGLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSLGVVIVEAAE
RSGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADILEALRPLMEPQLPYDCKIEEPRSDEEMSPP
GDDERSVIASALGPSPVEIDDIIRHTGFSAAAVHLVLLELDIAGRLNRHAGGRVSLFVAD

Sequences:

>Translated_380_residues
MPHEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDALPELSKHGGSSRRLRIATPSEAEGEIETA
EKFGARFIGIGEPDYPPALRQMDGAPPLIAMKGSADAATRACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARG
IDAAAHRASLATGTVAMLAGGLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSLGVVIVEAAE
RSGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADILEALRPLMEPQLPYDCKIEEPRSDEEMSPP
GDDERSVIASALGPSPVEIDDIIRHTGFSAAAVHLVLLELDIAGRLNRHAGGRVSLFVAD
>Mature_379_residues
PHEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDALPELSKHGGSSRRLRIATPSEAEGEIETAE
KFGARFIGIGEPDYPPALRQMDGAPPLIAMKGSADAATRACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARGI
DAAAHRASLATGTVAMLAGGLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSLGVVIVEAAER
SGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADILEALRPLMEPQLPYDCKIEEPRSDEEMSPPG
DDERSVIASALGPSPVEIDDIIRHTGFSAAAVHLVLLELDIAGRLNRHAGGRVSLFVAD

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=364, Percent_Identity=33.5164835164835, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40387; Mature: 40256

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDALPELSKHGG
CCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
SSRRLRIATPSEAEGEIETAEKFGARFIGIGEPDYPPALRQMDGAPPLIAMKGSADAATR
CCCEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCHHHHHCCCCCCEEEECCCCCHHHH
ACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARGIDAAAHRASLATGTVAMLAG
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSLGVVIVEAAE
CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC
RSGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADILEALRPLMEP
CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHCC
QLPYDCKIEEPRSDEEMSPPGDDERSVIASALGPSPVEIDDIIRHTGFSAAAVHLVLLEL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHEE
DIAGRLNRHAGGRVSLFVAD
HHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure 
PHEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDALPELSKHGG
CCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
SSRRLRIATPSEAEGEIETAEKFGARFIGIGEPDYPPALRQMDGAPPLIAMKGSADAATR
CCCEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCHHHHHCCCCCCEEEECCCCCHHHH
ACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARGIDAAAHRASLATGTVAMLAG
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSLGVVIVEAAE
CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC
RSGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADILEALRPLMEP
CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHCC
QLPYDCKIEEPRSDEEMSPPGDDERSVIASALGPSPVEIDDIIRHTGFSAAAVHLVLLEL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHEE
DIAGRLNRHAGGRVSLFVAD
HHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]