Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184671
Identifier: 159184671
GI number: 159184671
Start: 1214843
End: 1215286
Strand: Direct
Name: 159184671
Synonym: Atu1221
Alternate gene names: NA
Gene position: 1214843-1215286 (Clockwise)
Preceding gene: 159184670
Following gene: 15888558
Centisome position: 42.75
GC content: 55.41
Gene sequence:
>444_bases TTGAGAGTATCCGCGTTAATTCTATCCGTTGCTTTGTCTTTTACAGTCGTTGCATCAGCCTCGGCAGGCATGCTGAACCA GGCAGAAAAATACACCGGACTGCATGAGTCCAAGAACAACAAGAGCCTCAAGAACATTCTTGGCGCAAATCCGCGCAGCA CCCCCTGGTGTGGCCTTTTCCTTCATGCCGTCGCTAGCAAGGCAGGCCGGCAGTCCCCCAAATCCTTTGGATTTGCGAAA TCCTGGACATCTTTCGGTTACGCCGTTCCAGTCAATCAGGCCAAACCCGGCGATGTCGTCGTCATTCGCAACGGCCGTGG TTATCATGCCGGCATTCTGAAGAGCATGAGCGGCAAGACGGCCCAGATCCTCGGCGGCAACCAGTCCGGCCGAGTGCAGG TCTCCAATTTCAACCGCAAGGCCATCGTTTCCGTCCGTCGCTGA
Upstream 100 bases:
>100_bases CAGTGCGCATGAATAGGCGTCTGATTTTTGCCCATTTCTCGTCAAATTGTCGCTAAATTGTCACAATACACGAGCGCCCT CTAACACAAGGGCGAGACGT
Downstream 100 bases:
>100_bases CGACGAGACAGTCTGATAAAGGCGGGCTCTGACCCGCCTTATACATTTCAAGACGCTTATGGCTGCTCCCTGACGCCAGG TGCCGCCTCGCGCTGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRVSALILSVALSFTVVASASAGMLNQAEKYTGLHESKNNKSLKNILGANPRSTPWCGLFLHAVASKAGRQSPKSFGFAK SWTSFGYAVPVNQAKPGDVVVIRNGRGYHAGILKSMSGKTAQILGGNQSGRVQVSNFNRKAIVSVRR
Sequences:
>Translated_147_residues MRVSALILSVALSFTVVASASAGMLNQAEKYTGLHESKNNKSLKNILGANPRSTPWCGLFLHAVASKAGRQSPKSFGFAK SWTSFGYAVPVNQAKPGDVVVIRNGRGYHAGILKSMSGKTAQILGGNQSGRVQVSNFNRKAIVSVRR >Mature_147_residues MRVSALILSVALSFTVVASASAGMLNQAEKYTGLHESKNNKSLKNILGANPRSTPWCGLFLHAVASKAGRQSPKSFGFAK SWTSFGYAVPVNQAKPGDVVVIRNGRGYHAGILKSMSGKTAQILGGNQSGRVQVSNFNRKAIVSVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15633; Mature: 15633
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSALILSVALSFTVVASASAGMLNQAEKYTGLHESKNNKSLKNILGANPRSTPWCGLF CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHH LHAVASKAGRQSPKSFGFAKSWTSFGYAVPVNQAKPGDVVVIRNGRGYHAGILKSMSGKT HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCE AQILGGNQSGRVQVSNFNRKAIVSVRR EEEECCCCCCEEEEECCCCEEEEEECC >Mature Secondary Structure MRVSALILSVALSFTVVASASAGMLNQAEKYTGLHESKNNKSLKNILGANPRSTPWCGLF CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHH LHAVASKAGRQSPKSFGFAKSWTSFGYAVPVNQAKPGDVVVIRNGRGYHAGILKSMSGKT HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCE AQILGGNQSGRVQVSNFNRKAIVSVRR EEEECCCCCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA