Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184650
Identifier: 159184650
GI number: 159184650
Start: 1170283
End: 1170819
Strand: Direct
Name: 159184650
Synonym: Atu1176
Alternate gene names: NA
Gene position: 1170283-1170819 (Clockwise)
Preceding gene: 159184648
Following gene: 159184651
Centisome position: 41.18
GC content: 57.36
Gene sequence:
>537_bases ATGATATTCGGGCTGTTCAAGAAGAAAAACAACAACCGCGCCATAGTCGACCGGCAATATGCGACCTTGACGGCGGCTGC GCGCACGCCCGCCTTTTATCTCGATCTAGGTGTTCCCGATACCGTCATGGGCCGTTTCGAGATGCTCTCGGTCATCATGA TTCTCTATTTCCGCCGCACCAAATCATCAGGTGTCAGCGGGCAGGAGATCGCCCAGGAGATCGTCGATGCCTTTTTCCAG GATATCGATCACTCCATCCGTGAATTGGGGATAGGTGATCAGGGCGTGCCGAAACGCATGAAGAAATTCGCCGGCATGTT CTATGGGCGGCTCGAATCCTATGCGGCGGCACTGGATGCATCCGACTGCGCCGCTCTTGCCGCAGCGCTCCGGCGCAATA TATATCCGCAGGTAGACGACGAGGCTCCCGAGATGGAGGGGCTGGCGGGCTGGATGATGGAAACATCCGATGCCCTTGCC GCCCAGTCCGAAGAGACGATAGCAACCGGAAGCCTGACGCTGCCCCTGCCTATATGA
Upstream 100 bases:
>100_bases TTGCAATTCGTGGATGCTTCGGTAAACCAGCTTTGACGATCATGCAACAAGTGCGATGGGCGGTAAGCGCATTCACCCGT CCCCTTCGGAAAAAAAAACG
Downstream 100 bases:
>100_bases TGAGGTTCACGATGAACGCGCGACACGCCGCAAATGACGACCTGCCTTTTTCCTATCCCGTCAAGGTAGGCCATATTTCC GCCAATCCGGTCAGGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: CBP3 Protein; Ubiquinol-Cytochrome C Reductase Chaperone; Ubiquinol-Cytochrome C Chaperone/Upf; Ubiquinol-Cytochrome C Chaperone Superfamily; CBP3 Protein Mitochondrial; Ubiquinol-Cytochrome C Chaperone/UPF; Ubiquinol-Cytochrome C Reductase Complex Chaperone CBP
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MIFGLFKKKNNNRAIVDRQYATLTAAARTPAFYLDLGVPDTVMGRFEMLSVIMILYFRRTKSSGVSGQEIAQEIVDAFFQ DIDHSIRELGIGDQGVPKRMKKFAGMFYGRLESYAAALDASDCAALAAALRRNIYPQVDDEAPEMEGLAGWMMETSDALA AQSEETIATGSLTLPLPI
Sequences:
>Translated_178_residues MIFGLFKKKNNNRAIVDRQYATLTAAARTPAFYLDLGVPDTVMGRFEMLSVIMILYFRRTKSSGVSGQEIAQEIVDAFFQ DIDHSIRELGIGDQGVPKRMKKFAGMFYGRLESYAAALDASDCAALAAALRRNIYPQVDDEAPEMEGLAGWMMETSDALA AQSEETIATGSLTLPLPI >Mature_178_residues MIFGLFKKKNNNRAIVDRQYATLTAAARTPAFYLDLGVPDTVMGRFEMLSVIMILYFRRTKSSGVSGQEIAQEIVDAFFQ DIDHSIRELGIGDQGVPKRMKKFAGMFYGRLESYAAALDASDCAALAAALRRNIYPQVDDEAPEMEGLAGWMMETSDALA AQSEETIATGSLTLPLPI
Specific function: Unknown
COG id: COG5452
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19569; Mature: 19569
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGLFKKKNNNRAIVDRQYATLTAAARTPAFYLDLGVPDTVMGRFEMLSVIMILYFRRT CCCCCEECCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC KSSGVSGQEIAQEIVDAFFQDIDHSIRELGIGDQGVPKRMKKFAGMFYGRLESYAAALDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH SDCAALAAALRRNIYPQVDDEAPEMEGLAGWMMETSDALAAQSEETIATGSLTLPLPI HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCC >Mature Secondary Structure MIFGLFKKKNNNRAIVDRQYATLTAAARTPAFYLDLGVPDTVMGRFEMLSVIMILYFRRT CCCCCEECCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC KSSGVSGQEIAQEIVDAFFQDIDHSIRELGIGDQGVPKRMKKFAGMFYGRLESYAAALDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH SDCAALAAALRRNIYPQVDDEAPEMEGLAGWMMETSDALAAQSEETIATGSLTLPLPI HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA