Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184644
Identifier: 159184644
GI number: 159184644
Start: 1156778
End: 1157305
Strand: Direct
Name: 159184644
Synonym: Atu1162
Alternate gene names: NA
Gene position: 1156778-1157305 (Clockwise)
Preceding gene: 15888496
Following gene: 15888501
Centisome position: 40.71
GC content: 57.58
Gene sequence:
>528_bases CTGCCTGACGGACGATGGTGTTTTGACAAGGCAGGCGGCGGGATTCAATATGGACTGGTCGCCCGCCCGTCGAGACCTTA TCTTCCGGCCATGGAACCTGATTCTCAACCTCTGCCGAAACGCCCGCTGACGGAAATCCTGTTTCTGGTCTTCATGAGAC TGGTTGCGGTTTCCTGTTTCTGGTTCGGCCTGCAATATTGGGCGATGCTGACCGGTTATTCGCTTGGCGGTCATGGACGC TTCGATATGCTGAACCTGCCCTGGCGAGTAGCGGGCAGCGCGCTGGCGGTTATTTTCCCGGTGGCGGCCCTCGGCCTGTG GCTCGGTGCCTCCTGGGGGGCGGTCATGTGGGTGATGGGCGCCGGCACGCAGATCGCCATGTATAAGGTATGGCCGCATA TCTTCGGTGCCAACACGTTGGTGCCCGTCATGCACGGTCTCGTGGCAACCATTTATATACTATTCCTGGTCGCTTTCTGG CTGGATCACCGCCAAAATGAAGAGCGCGCAAGAATTGATTTACCATAA
Upstream 100 bases:
>100_bases TGCGTTTTGTCCTGCATGTCAGAATGTCCTTCGATAAAATTTGGAAAGCTGCATACCATGAACATTGGCCCATGCGAATG CGACAATCTTCCCTCATCGG
Downstream 100 bases:
>100_bases GAATAAAGCAATTCGGCCTGTTTTCAGGCCGGTTTTTCCGCTTAAGTCATTGATTTATAATGTACTGGCTCTGAGCATTC CCGCTTCGCCACAAGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPDGRWCFDKAGGGIQYGLVARPSRPYLPAMEPDSQPLPKRPLTEILFLVFMRLVAVSCFWFGLQYWAMLTGYSLGGHGR FDMLNLPWRVAGSALAVIFPVAALGLWLGASWGAVMWVMGAGTQIAMYKVWPHIFGANTLVPVMHGLVATIYILFLVAFW LDHRQNEERARIDLP
Sequences:
>Translated_175_residues MPDGRWCFDKAGGGIQYGLVARPSRPYLPAMEPDSQPLPKRPLTEILFLVFMRLVAVSCFWFGLQYWAMLTGYSLGGHGR FDMLNLPWRVAGSALAVIFPVAALGLWLGASWGAVMWVMGAGTQIAMYKVWPHIFGANTLVPVMHGLVATIYILFLVAFW LDHRQNEERARIDLP >Mature_174_residues PDGRWCFDKAGGGIQYGLVARPSRPYLPAMEPDSQPLPKRPLTEILFLVFMRLVAVSCFWFGLQYWAMLTGYSLGGHGRF DMLNLPWRVAGSALAVIFPVAALGLWLGASWGAVMWVMGAGTQIAMYKVWPHIFGANTLVPVMHGLVATIYILFLVAFWL DHRQNEERARIDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19596; Mature: 19465
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGRWCFDKAGGGIQYGLVARPSRPYLPAMEPDSQPLPKRPLTEILFLVFMRLVAVSCF CCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WFGLQYWAMLTGYSLGGHGRFDMLNLPWRVAGSALAVIFPVAALGLWLGASWGAVMWVMG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC AGTQIAMYKVWPHIFGANTLVPVMHGLVATIYILFLVAFWLDHRQNEERARIDLP CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PDGRWCFDKAGGGIQYGLVARPSRPYLPAMEPDSQPLPKRPLTEILFLVFMRLVAVSCF CCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WFGLQYWAMLTGYSLGGHGRFDMLNLPWRVAGSALAVIFPVAALGLWLGASWGAVMWVMG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC AGTQIAMYKVWPHIFGANTLVPVMHGLVATIYILFLVAFWLDHRQNEERARIDLP CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA