Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is creD [H]

Identifier: 159184640

GI number: 159184640

Start: 1147304

End: 1148689

Strand: Direct

Name: creD [H]

Synonym: Atu1155

Alternate gene names: 159184640

Gene position: 1147304-1148689 (Clockwise)

Preceding gene: 15888492

Following gene: 159184641

Centisome position: 40.38

GC content: 58.37

Gene sequence:

>1386_bases
ATGCCGCGCGGCAATTTTGCCGCCAGCCTGCGTTCACCCGGCGCGAAGTTTCTGATGATAGGTTTCATTTCGTTGGTTCT
GCTGGTTCCGCTCTTGCTCGTCTGGGGGCTGACGGAAGAGCGCGCCTCGCGGGCGAGGGAGGTTTCCGCCCGGATCGCGA
ACGGGTGGGGCGGCGATCAGGTTGTGAACGGCCCTTATCTCGCCGTACCCTTCGATGTCGAACGTCGCCGCGAGGTCGAT
GGCCGAACCATTGTGGACCGCACGACAGAGTGGGCGCTGGTCATGCCGGAAACGCTGCAGGTAACGGCCGACCTCAAGAC
CGAGGAAAAGAAGCTCTCGATCTACAGCTTGCCTGTCTATAACGGTGCTCTCGTGCTCAAGGGCCGCTTCGGACAGGGCG
TCCTGCAAGATCTCGCCCGTTTTGCCGGCACACCGCGTCTCGACAATGCCATCCTCGTCCTCAGCATAGGGGATATTACC
GGCATAAGATCGAGCGCCGGGGTTCGCATAAACGGCGGCGCAGTTTTGCCCTTCGATCCCGGCATGCGCGATATGTCCGT
TATCGCAAGCCGCGCCCTCGAAAATAACTCCATAAGATCAGATGCGGGCGTGCACAGGCAGATCGACAGGAACCTCATCG
AGAGTGGCTTTGATTTCGATATCGCATTTTCGCTGAATGGTTCTGGCAGTTTCGCAGTTGCGCCGGCCGGCCAGACAACG
AGCTTCACGGCAAAAGCCGACTGGCCGCATCCCGGTTTTGAAGGTTTGTTCCTGCCGGAGGTCAAAACGGTCACGGCTGC
GGATTTCAACGCCAGCTGGACGATTCCCTATCTCGCAAGGGGAATAGATCGCGTGGTGGAGGGTCCGCGACTGCCGCTCT
CCAACAGCCTGATGACGATCAATCTCGTGGAACCGGTGAAGTTCTACCAGGTCATCGCCCGGACACTGAAATATTCCATC
GGCTTCATCTCGCTTGTCTTCCTCGCCGTCTTCATTGTGGAACTCAAGGGCGGCAGCGTTGTGCACTGGATACAATATGT
GCTGACGGGTCTGGCGCTCATCGTCTTCTATGTGCTGCTGCTCGCATTAGCCGAACATACGGGTTTCACCGTTGCCTATG
CCGCTGCCTCCTTTTCCACGGCGGCCCTGATTGCCTTTTATCTTGGCAGTGCCACCCGTAGTCGCAGAAACGGTCTTGCA
CTTTTCAGTGTTCTGGCGGTGGCCTACGGTGTGATGTATCTGGTTCTGAACGAAGACGAATATGCGCTGCTGGCGGGCGC
GGTCATATCGTTTATCGCCATCGCTGCAACCATGTTTGCGACGCGCAAAGTCGATTGGTCTGGAGCCGGCACCGCCGCGA
ACAGCGAGTTCTCCAGCCGCACCTGA

Upstream 100 bases:

>100_bases
CTTTTTCCGGTTCTGGCGCGATCATATTTAAGAGGATTTCCGAATGGTACATGAGACGGACAAAGACCCGGCGCCGGCGG
TCGGGCCGCTTGCTTCAGCC

Downstream 100 bases:

>100_bases
CGCGAGACCGCATGGTCTGAAAAGCGGGCTGCTTAACTTGCGGCCCGCTTTTTTGCTGTTTATAGGTGGATTACTCACCA
CGGACCCGGTGAAATCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MPRGNFAASLRSPGAKFLMIGFISLVLLVPLLLVWGLTEERASRAREVSARIANGWGGDQVVNGPYLAVPFDVERRREVD
GRTIVDRTTEWALVMPETLQVTADLKTEEKKLSIYSLPVYNGALVLKGRFGQGVLQDLARFAGTPRLDNAILVLSIGDIT
GIRSSAGVRINGGAVLPFDPGMRDMSVIASRALENNSIRSDAGVHRQIDRNLIESGFDFDIAFSLNGSGSFAVAPAGQTT
SFTAKADWPHPGFEGLFLPEVKTVTAADFNASWTIPYLARGIDRVVEGPRLPLSNSLMTINLVEPVKFYQVIARTLKYSI
GFISLVFLAVFIVELKGGSVVHWIQYVLTGLALIVFYVLLLALAEHTGFTVAYAAASFSTAALIAFYLGSATRSRRNGLA
LFSVLAVAYGVMYLVLNEDEYALLAGAVISFIAIAATMFATRKVDWSGAGTAANSEFSSRT

Sequences:

>Translated_461_residues
MPRGNFAASLRSPGAKFLMIGFISLVLLVPLLLVWGLTEERASRAREVSARIANGWGGDQVVNGPYLAVPFDVERRREVD
GRTIVDRTTEWALVMPETLQVTADLKTEEKKLSIYSLPVYNGALVLKGRFGQGVLQDLARFAGTPRLDNAILVLSIGDIT
GIRSSAGVRINGGAVLPFDPGMRDMSVIASRALENNSIRSDAGVHRQIDRNLIESGFDFDIAFSLNGSGSFAVAPAGQTT
SFTAKADWPHPGFEGLFLPEVKTVTAADFNASWTIPYLARGIDRVVEGPRLPLSNSLMTINLVEPVKFYQVIARTLKYSI
GFISLVFLAVFIVELKGGSVVHWIQYVLTGLALIVFYVLLLALAEHTGFTVAYAAASFSTAALIAFYLGSATRSRRNGLA
LFSVLAVAYGVMYLVLNEDEYALLAGAVISFIAIAATMFATRKVDWSGAGTAANSEFSSRT
>Mature_460_residues
PRGNFAASLRSPGAKFLMIGFISLVLLVPLLLVWGLTEERASRAREVSARIANGWGGDQVVNGPYLAVPFDVERRREVDG
RTIVDRTTEWALVMPETLQVTADLKTEEKKLSIYSLPVYNGALVLKGRFGQGVLQDLARFAGTPRLDNAILVLSIGDITG
IRSSAGVRINGGAVLPFDPGMRDMSVIASRALENNSIRSDAGVHRQIDRNLIESGFDFDIAFSLNGSGSFAVAPAGQTTS
FTAKADWPHPGFEGLFLPEVKTVTAADFNASWTIPYLARGIDRVVEGPRLPLSNSLMTINLVEPVKFYQVIARTLKYSIG
FISLVFLAVFIVELKGGSVVHWIQYVLTGLALIVFYVLLLALAEHTGFTVAYAAASFSTAALIAFYLGSATRSRRNGLAL
FSVLAVAYGVMYLVLNEDEYALLAGAVISFIAIAATMFATRKVDWSGAGTAANSEFSSRT

Specific function: Unknown

COG id: COG4452

COG function: function code V; Inner membrane protein involved in colicin E2 resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790862, Length=410, Percent_Identity=31.9512195121951, Blast_Score=201, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010364 [H]

Pfam domain/function: PF06123 CreD [H]

EC number: NA

Molecular weight: Translated: 49775; Mature: 49644

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGNFAASLRSPGAKFLMIGFISLVLLVPLLLVWGLTEERASRAREVSARIANGWGGDQ
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VVNGPYLAVPFDVERRREVDGRTIVDRTTEWALVMPETLQVTADLKTEEKKLSIYSLPVY
EECCCEEEEECCHHHHHCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCEEEEEEECCC
NGALVLKGRFGQGVLQDLARFAGTPRLDNAILVLSIGDITGIRSSAGVRINGGAVLPFDP
CCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEECCCC
GMRDMSVIASRALENNSIRSDAGVHRQIDRNLIESGFDFDIAFSLNGSGSFAVAPAGQTT
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCC
SFTAKADWPHPGFEGLFLPEVKTVTAADFNASWTIPYLARGIDRVVEGPRLPLSNSLMTI
EEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
NLVEPVKFYQVIARTLKYSIGFISLVFLAVFIVELKGGSVVHWIQYVLTGLALIVFYVLL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LALAEHTGFTVAYAAASFSTAALIAFYLGSATRSRRNGLALFSVLAVAYGVMYLVLNEDE
HHHHHCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCEEEEEECCCC
YALLAGAVISFIAIAATMFATRKVDWSGAGTAANSEFSSRT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRGNFAASLRSPGAKFLMIGFISLVLLVPLLLVWGLTEERASRAREVSARIANGWGGDQ
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VVNGPYLAVPFDVERRREVDGRTIVDRTTEWALVMPETLQVTADLKTEEKKLSIYSLPVY
EECCCEEEEECCHHHHHCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCEEEEEEECCC
NGALVLKGRFGQGVLQDLARFAGTPRLDNAILVLSIGDITGIRSSAGVRINGGAVLPFDP
CCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEECCCC
GMRDMSVIASRALENNSIRSDAGVHRQIDRNLIESGFDFDIAFSLNGSGSFAVAPAGQTT
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCC
SFTAKADWPHPGFEGLFLPEVKTVTAADFNASWTIPYLARGIDRVVEGPRLPLSNSLMTI
EEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
NLVEPVKFYQVIARTLKYSIGFISLVFLAVFIVELKGGSVVHWIQYVLTGLALIVFYVLL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LALAEHTGFTVAYAAASFSTAALIAFYLGSATRSRRNGLALFSVLAVAYGVMYLVLNEDE
HHHHHCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCEEEEEECCCC
YALLAGAVISFIAIAATMFATRKVDWSGAGTAANSEFSSRT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]