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The map label for this gene is ompT [C]

Identifier: 159184633

GI number: 159184633

Start: 1128351

End: 1128821

Strand: Reverse

Name: ompT [C]

Synonym: Atu1139

Alternate gene names: 159184633

Gene position: 1128821-1128351 (Counterclockwise)

Preceding gene: 159184634

Following gene: 15888475

Centisome position: 39.73

GC content: 53.93

Gene sequence:

>471_bases
ATGCGATTTTCGAGATTTTCCCTGCCGCTTTCTGCGGCTCTGCTGATGGGCACCTGCCTGCCACTCGCCGCTGAACAAAG
CGGCATTACAGCCTCACTGGATGCCGGCGTTCTTAACATTAAGGCAACGGAAAAATTCTATAGCGGCAGTCATAAAAACA
GTCAGCTCGACTGGAAAACGACAAATGCGATGGCTCTGCGCGGATCGCTTGGATTTGAGCTTTCACCCGATTGGCGCATC
AAAACGGAAGGTCGTATCGGCTTTGCAGGTGATGGCTTCATGACCGACTACGATTGGCTCAGCCCGTTTTACAGAGATAC
ATCGAAGAATGGATGGAGCCACCGTTCAGAGCACGGCGACACGCGGCTGGACCACTACCTGACTGGAAGTATAGAATTAA
ACCGCACCCTGCTGGAGGACCCGCTGCAACACCTCAGCGCCGGCGTCGGCTTTCGTTACACCGACGTGTAA

Upstream 100 bases:

>100_bases
AGTGGTGTTTTTCGGGAAAATAAACCGATCATTTACCATAATCACTCTTAATGCCCGCAACGGCCCCTATTTCAGGCCCT
CCGGTCATTCAGGAGCGATC

Downstream 100 bases:

>100_bases
TGGTCCTCATATGGCGGAAACTACATCTACAGCTCCCGAGGTTTCCGCGATAATGTCGGTGAGTTCGGAAACAGCGAAAA
AGCGATTACTTACAGACAGC

Product: hypothetical protein

Products: Hydrolyzed protein [C]

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRFSRFSLPLSAALLMGTCLPLAAEQSGITASLDAGVLNIKATEKFYSGSHKNSQLDWKTTNAMALRGSLGFELSPDWRI
KTEGRIGFAGDGFMTDYDWLSPFYRDTSKNGWSHRSEHGDTRLDHYLTGSIELNRTLLEDPLQHLSAGVGFRYTDV

Sequences:

>Translated_156_residues
MRFSRFSLPLSAALLMGTCLPLAAEQSGITASLDAGVLNIKATEKFYSGSHKNSQLDWKTTNAMALRGSLGFELSPDWRI
KTEGRIGFAGDGFMTDYDWLSPFYRDTSKNGWSHRSEHGDTRLDHYLTGSIELNRTLLEDPLQHLSAGVGFRYTDV
>Mature_156_residues
MRFSRFSLPLSAALLMGTCLPLAAEQSGITASLDAGVLNIKATEKFYSGSHKNSQLDWKTTNAMALRGSLGFELSPDWRI
KTEGRIGFAGDGFMTDYDWLSPFYRDTSKNGWSHRSEHGDTRLDHYLTGSIELNRTLLEDPLQHLSAGVGFRYTDV

Specific function: Protease That Can Cleave T7 RNA Polymerase, Ferric Enterobactin Receptor Protein (Fep), Antimicrobial Peptide Protamine And Other Proteins. This Protease Has A Specificity For Paired Basic Residues. [C]

COG id: COG4571

COG function: function code M; Outer membrane protease

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.87 [C]

Molecular weight: Translated: 17382; Mature: 17382

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSRFSLPLSAALLMGTCLPLAAEQSGITASLDAGVLNIKATEKFYSGSHKNSQLDWKT
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECHHHHCCCCCCCCCCEEC
TNAMALRGSLGFELSPDWRIKTEGRIGFAGDGFMTDYDWLSPFYRDTSKNGWSHRSEHGD
CCEEEEECCCCCEECCCEEEEECCEEEECCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCC
TRLDHYLTGSIELNRTLLEDPLQHLSAGVGFRYTDV
CCCCEEEECCEEECHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MRFSRFSLPLSAALLMGTCLPLAAEQSGITASLDAGVLNIKATEKFYSGSHKNSQLDWKT
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECHHHHCCCCCCCCCCEEC
TNAMALRGSLGFELSPDWRIKTEGRIGFAGDGFMTDYDWLSPFYRDTSKNGWSHRSEHGD
CCEEEEECCCCCEECCCEEEEECCEEEECCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCC
TRLDHYLTGSIELNRTLLEDPLQHLSAGVGFRYTDV
CCCCEEEECCEEECHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: EDTA; Tosyl-L-Lys chloromethyl ketone [C]

Metal ions: NA

Kcat value (1/min): 40 [C]

Specific activity: 58.7

Km value (mM): 0.0036 {plasminogen}} 0.000058 {plasminogen}} [C]

Substrates: Protein; H2O [C]

Specific reaction: Protein + H2O = hydrolyzed protein [C]

General reaction: Peptide bond hydrolysis [C]

Inhibitor: Arginine; Benzamidine; Co2+; Cu2+; Diisopropyl fluorophosphate; Fe2+; NaCl; Tosyl -L-phenyl alaninechloromethyl ketone; Zn2+ [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA