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The map label for this gene is holC

Identifier: 159184617

GI number: 159184617

Start: 1101373

End: 1101822

Strand: Direct

Name: holC

Synonym: Atu1111

Alternate gene names: NA

Gene position: 1101373-1101822 (Clockwise)

Preceding gene: 159184616

Following gene: 159184618

Centisome position: 38.76

GC content: 58.22

Gene sequence:

>450_bases
ATGACTGAAATTCTGTTCTACCATCTGACGGAATCGAAGCTGGAGGATGCGCTGCCGCCTTTGCTCGAGAAATCGCTGGA
ACGCGGCTGGAAGGTCGCGATCCAGACTGTCGACGATGAGCGTCGTGATTTCCTCGACACGCATCTGTGGACCTTTCGTG
ACGATAGTTTCCTGCCGCACGCCACCGATGCGTCGTCAGCGCCGCAGAACCAGCCGATTCTTCTGACGGCGTCGAGCGAG
AACGGCAATGCGGCGAACGTACGCTTTCTGGTCGACGGCGCCGAGCCGCTAGCGGTGGAGACCTATGAGCGCGTCGTCTT
CATGTTCGACGGATACGACGCCTACCAGCTGGAAATGGCGCGTAACCACTGGAAAACGCTGAAGGCAGAGGGGCATTCGC
TGACCTATTGGCAGCAATCTCCCGAAGGTCGCTGGCAAAAAAAGGCCTGA

Upstream 100 bases:

>100_bases
ATCAACCAGTCCTGGGGATCGGGCTACGGTGTGCGTCTGCTGAACGAACTCGTTCGTGCCCATTACGAAGATTGAAGCGA
GCGGAGCGGCGCGTCTGCGA

Downstream 100 bases:

>100_bases
CTGCCGCCCGGCCATATTCAGACCAGCCCACTGGAATGGACTGGTAAGAAATCGCATGTGGCGTCGCTTGCAACCTTTTG
CTTTATGAAGTGCTTAAGTA

Product: DNA polymerase III subunit chi

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Superfamily; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDDERRDFLDTHLWTFRDDSFLPHATDASSAPQNQPILLTASSE
NGNAANVRFLVDGAEPLAVETYERVVFMFDGYDAYQLEMARNHWKTLKAEGHSLTYWQQSPEGRWQKKA

Sequences:

>Translated_149_residues
MTEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDDERRDFLDTHLWTFRDDSFLPHATDASSAPQNQPILLTASSE
NGNAANVRFLVDGAEPLAVETYERVVFMFDGYDAYQLEMARNHWKTLKAEGHSLTYWQQSPEGRWQKKA
>Mature_148_residues
TEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDDERRDFLDTHLWTFRDDSFLPHATDASSAPQNQPILLTASSEN
GNAANVRFLVDGAEPLAVETYERVVFMFDGYDAYQLEMARNHWKTLKAEGHSLTYWQQSPEGRWQKKA

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 17202; Mature: 17071

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDDERRDFLDTHLWTFRDDSFLPH
CCEEEEEEECHHHHHHCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHCEEECCCCCCCC
ATDASSAPQNQPILLTASSENGNAANVRFLVDGAEPLAVETYERVVFMFDGYDAYQLEMA
CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEHHHH
RNHWKTLKAEGHSLTYWQQSPEGRWQKKA
HHHHHHECCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDDERRDFLDTHLWTFRDDSFLPH
CEEEEEEECHHHHHHCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHCEEECCCCCCCC
ATDASSAPQNQPILLTASSENGNAANVRFLVDGAEPLAVETYERVVFMFDGYDAYQLEMA
CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEHHHH
RNHWKTLKAEGHSLTYWQQSPEGRWQKKA
HHHHHHECCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA