Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pssA [H]
Identifier: 159184598
GI number: 159184598
Start: 1052217
End: 1053083
Strand: Reverse
Name: pssA [H]
Synonym: Atu1062
Alternate gene names: 159184598
Gene position: 1053083-1052217 (Counterclockwise)
Preceding gene: 159184599
Following gene: 15888403
Centisome position: 37.06
GC content: 61.25
Gene sequence:
>867_bases ATGGAAACGCCGATTTCGGAGCCGCAGCAGAACGGAAAACAGGAGGGCCGCAGTGATAGCGGCCGTGGGCCGCGCCTGAG GGAAATTCCCTTTCGCCTCCTGGTGCCCAATCTGATCACCGTTCTCGCGATCTGCGCAGGCTTGAGCGGCGTACGCCTTG CCATCGAAGGCCGCTTTGAACTCGCCGTCGGTATGGTGCTCCTCGCCGCCTTTCTCGACGGCGTGGACGGGCGTGTTGCC CGCATGATGAAGGCGACCTCCAAATTCGGCGAGCAGATGGATTCGCTTGCCGATATCGTCAATTTCGGTGTCGCTCCTGC TCTCGTCGTCTATATCTATCTGCTCGATCAGGCGCGTTCGATTGGCTGGATCGGCGCCCTCATCTATGTCATTGCCGCCG GCCTGCGCCTGGCGCGCTTCAACGTCATGATCGAGCGGCCGGTAAAGGCGCCTTGGCAGAGCGAATTTTTTGTCGGCGTT CCGGCCCCGATGGGCGCGATGCTGGTGCTTCTGCCGGTCTATCTCGGCTTCCTCGGCGTGGAGCCGGACAAGCCCTTCGC TTACGTCGCCGCCGCCTACACCGTCCTGATCGGTTATCTTCTCATCAGCCGTCTGCCGGTCTGGTCGGGAAAGTCCAGTA CCCGCATTCGCCGTGATCTGGTGCTGCCGATGATCCTCGTCGTCGTGCTCTATGTGGCGATGCTGATGAGCTTCACCTGG GAAGTTCTGGTTCTGACGGTCGCCGCCTATCTCGTCTTCATTCCCATCAGCGCCCGCCTCTGGCATCGCCGCTACGGTAC GCTGACCATCGAGGAAGACGCGCATGACGATGCCAATGGCGGCAACGGCCTCGATCGCGGCATTTAA
Upstream 100 bases:
>100_bases AGACGGCAATCGCCGGTGAGACCGTGCTTGCCGAATTCGGCTCGGCCAAGGGTCCGGTCCTTAGCCGTCGCGGCTAAGGA TAAACAGGAAGGGCATGCGC
Downstream 100 bases:
>100_bases AACCGCAGGTTTATTTTTTGCCAGACAAGCCGGTGCAGGATGTGACGCAAAATGTCGCAGCCTGAAAAACCGTCTTCGTC TCTTTCGCCTCGAATCCGTC
Product: phosphatidylserine synthase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues METPISEPQQNGKQEGRSDSGRGPRLREIPFRLLVPNLITVLAICAGLSGVRLAIEGRFELAVGMVLLAAFLDGVDGRVA RMMKATSKFGEQMDSLADIVNFGVAPALVVYIYLLDQARSIGWIGALIYVIAAGLRLARFNVMIERPVKAPWQSEFFVGV PAPMGAMLVLLPVYLGFLGVEPDKPFAYVAAAYTVLIGYLLISRLPVWSGKSSTRIRRDLVLPMILVVVLYVAMLMSFTW EVLVLTVAAYLVFIPISARLWHRRYGTLTIEEDAHDDANGGNGLDRGI
Sequences:
>Translated_288_residues METPISEPQQNGKQEGRSDSGRGPRLREIPFRLLVPNLITVLAICAGLSGVRLAIEGRFELAVGMVLLAAFLDGVDGRVA RMMKATSKFGEQMDSLADIVNFGVAPALVVYIYLLDQARSIGWIGALIYVIAAGLRLARFNVMIERPVKAPWQSEFFVGV PAPMGAMLVLLPVYLGFLGVEPDKPFAYVAAAYTVLIGYLLISRLPVWSGKSSTRIRRDLVLPMILVVVLYVAMLMSFTW EVLVLTVAAYLVFIPISARLWHRRYGTLTIEEDAHDDANGGNGLDRGI >Mature_288_residues METPISEPQQNGKQEGRSDSGRGPRLREIPFRLLVPNLITVLAICAGLSGVRLAIEGRFELAVGMVLLAAFLDGVDGRVA RMMKATSKFGEQMDSLADIVNFGVAPALVVYIYLLDQARSIGWIGALIYVIAAGLRLARFNVMIERPVKAPWQSEFFVGV PAPMGAMLVLLPVYLGFLGVEPDKPFAYVAAAYTVLIGYLLISRLPVWSGKSSTRIRRDLVLPMILVVVLYVAMLMSFTW EVLVLTVAAYLVFIPISARLWHRRYGTLTIEEDAHDDANGGNGLDRGI
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=183, Percent_Identity=32.7868852459016, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31594; Mature: 31594
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPISEPQQNGKQEGRSDSGRGPRLREIPFRLLVPNLITVLAICAGLSGVRLAIEGRFE CCCCCCCHHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH LAVGMVLLAAFLDGVDGRVARMMKATSKFGEQMDSLADIVNFGVAPALVVYIYLLDQARS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IGWIGALIYVIAAGLRLARFNVMIERPVKAPWQSEFFVGVPAPMGAMLVLLPVYLGFLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC EPDKPFAYVAAAYTVLIGYLLISRLPVWSGKSSTRIRRDLVLPMILVVVLYVAMLMSFTW CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLVLTVAAYLVFIPISARLWHRRYGTLTIEEDAHDDANGGNGLDRGI HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure METPISEPQQNGKQEGRSDSGRGPRLREIPFRLLVPNLITVLAICAGLSGVRLAIEGRFE CCCCCCCHHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH LAVGMVLLAAFLDGVDGRVARMMKATSKFGEQMDSLADIVNFGVAPALVVYIYLLDQARS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IGWIGALIYVIAAGLRLARFNVMIERPVKAPWQSEFFVGVPAPMGAMLVLLPVYLGFLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC EPDKPFAYVAAAYTVLIGYLLISRLPVWSGKSSTRIRRDLVLPMILVVVLYVAMLMSFTW CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLVLTVAAYLVFIPISARLWHRRYGTLTIEEDAHDDANGGNGLDRGI HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]