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The map label for this gene is yedJ [H]

Identifier: 15888385

GI number: 15888385

Start: 1034646

End: 1035290

Strand: Reverse

Name: yedJ [H]

Synonym: Atu1043

Alternate gene names: 15888385

Gene position: 1035290-1034646 (Counterclockwise)

Preceding gene: 159184592

Following gene: 159184591

Centisome position: 36.43

GC content: 62.64

Gene sequence:

>645_bases
ATGATCGCGGCCGAGGCTTTCGCACCCCATGCGGCGCTTGCGCAGGACCTGATACCGCACGCCGCCGATACCGGCGACGG
CTCGCACGACCTTGCCCATATTCACCGCGTCTTCCGCAACGCCATGCGCATCCATGCGGGCGAAGGCGGCGATGGCAATG
TGCTGGCGGCAAGCGTGCTGCTGCATGATTGCGTGGCGGTGGAGAAGAACTCGCCCTTGCGGGCACAGGCCTCAAGGCTT
GCGGCGGAAAAAGCATCAGGCATTCTGGCGGGGCTCGGCTGGCAGAAGCAGGATATCGATGCCGCCGCGCATGCCATCAC
CACCCACAGCTTTTCCGCCAATATCGAGCCGCAGACACTGGAGGCAAAAATCCTTCAGGATGCCGACCGGCTGGATGCCA
TCGGCATGGTGGGGGCGGCCCGCTGCTTTTATATTGCCGGGCGCATGGGCTCGGCGCTTTACGATCCGGCCGATCCGCTG
GCGAAGGAGCGACCGCTTGATGATCGCGCCTTTGCCATCGACCATTTCGAAACCAAGCTATTCAAACTGGCCGATGGCTT
CCGCACCGAAACCGGGCGGCAGATGGCCAAAGCCCGCCATGAGCGGCTGAAACAGGTGCTCGACCTGTTTCTCGACGAGA
TTTGA

Upstream 100 bases:

>100_bases
TTGAAGGTGTGCTGAGAGCCCTGTCCTTCATCGGCCTCGGTGCGGTGCTGATCGGCATCGGCCTGTTCTACCAGAAAATC
CTGACCCGGAAGCCGCAGGC

Downstream 100 bases:

>100_bases
GGATATCGAAGATGCTTGTGACCGAACTCAACATCTATCCGCTGAAGAGCGCGCGCGGCATTGCGCTTAAGGAAAGCGCC
GTTTCGGCCGAAGGCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIAAEAFAPHAALAQDLIPHAADTGDGSHDLAHIHRVFRNAMRIHAGEGGDGNVLAASVLLHDCVAVEKNSPLRAQASRL
AAEKASGILAGLGWQKQDIDAAAHAITTHSFSANIEPQTLEAKILQDADRLDAIGMVGAARCFYIAGRMGSALYDPADPL
AKERPLDDRAFAIDHFETKLFKLADGFRTETGRQMAKARHERLKQVLDLFLDEI

Sequences:

>Translated_214_residues
MIAAEAFAPHAALAQDLIPHAADTGDGSHDLAHIHRVFRNAMRIHAGEGGDGNVLAASVLLHDCVAVEKNSPLRAQASRL
AAEKASGILAGLGWQKQDIDAAAHAITTHSFSANIEPQTLEAKILQDADRLDAIGMVGAARCFYIAGRMGSALYDPADPL
AKERPLDDRAFAIDHFETKLFKLADGFRTETGRQMAKARHERLKQVLDLFLDEI
>Mature_214_residues
MIAAEAFAPHAALAQDLIPHAADTGDGSHDLAHIHRVFRNAMRIHAGEGGDGNVLAASVLLHDCVAVEKNSPLRAQASRL
AAEKASGILAGLGWQKQDIDAAAHAITTHSFSANIEPQTLEAKILQDADRLDAIGMVGAARCFYIAGRMGSALYDPADPL
AKERPLDDRAFAIDHFETKLFKLADGFRTETGRQMAKARHERLKQVLDLFLDEI

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=174, Percent_Identity=45.4022988505747, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23092; Mature: 23092

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAEAFAPHAALAQDLIPHAADTGDGSHDLAHIHRVFRNAMRIHAGEGGDGNVLAASVL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
LHDCVAVEKNSPLRAQASRLAAEKASGILAGLGWQKQDIDAAAHAITTHSFSANIEPQTL
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
EAKILQDADRLDAIGMVGAARCFYIAGRMGSALYDPADPLAKERPLDDRAFAIDHFETKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH
FKLADGFRTETGRQMAKARHERLKQVLDLFLDEI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAAEAFAPHAALAQDLIPHAADTGDGSHDLAHIHRVFRNAMRIHAGEGGDGNVLAASVL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
LHDCVAVEKNSPLRAQASRLAAEKASGILAGLGWQKQDIDAAAHAITTHSFSANIEPQTL
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
EAKILQDADRLDAIGMVGAARCFYIAGRMGSALYDPADPLAKERPLDDRAFAIDHFETKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH
FKLADGFRTETGRQMAKARHERLKQVLDLFLDEI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]