Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184552
Identifier: 159184552
GI number: 159184552
Start: 948308
End: 948703
Strand: Direct
Name: 159184552
Synonym: Atu0959
Alternate gene names: NA
Gene position: 948308-948703 (Clockwise)
Preceding gene: 15888297
Following gene: 15888306
Centisome position: 33.37
GC content: 62.37
Gene sequence:
>396_bases ATGAGCGCTGTCAACGCCTTGCTGCAGGCGATTTTCGCGCGGCTGACGGGCGACGCGGCGCTGATGACGCTCATCACCGG CGGCGTTGTCGACCGGCTTCTGCCGCACGCTGTTCTGCCGTGCATCGTGCTCGGCGATCTTGAAAGCCGGGACTATTCGA CGGCGACGGAAAAGGCCGAGGAGCATTTCCTGTCGCTGCAAATCTGGAGCGATGCCAATGGCCGCAAGGGGGCGGGGGAA ATCGCCGCTCGGGTGAAAAACCTGCTCGACGATGCGGCGTTGTCGATCGCGGGTGTCTCCCTCGTCAATCTGCAGCTTCT ATCAAGCCGCTCGCGGCGCGAGACGAAGACCCGGAACTTTGTTTCGGAGATGCGTTTCAGGGCCGTGACGGAATAG
Upstream 100 bases:
>100_bases TGCGCTTTCGCAAAGACCGTCGCATTCTGGCGATCCGGGCGACGATGGATCCCGACGAGACGCGCCGCTTCATCGTCTGC CGTTGCGAGGAGGAAAGCCG
Downstream 100 bases:
>100_bases CGTTGCGTCAGGCCCCCTGTCTGACTGTTCTCCATAACAGAATCAACAGCAGCACGGAAAGGCCGATCAGAATGGAGGCG ATGCCCAGCATGGCGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSAVNALLQAIFARLTGDAALMTLITGGVVDRLLPHAVLPCIVLGDLESRDYSTATEKAEEHFLSLQIWSDANGRKGAGE IAARVKNLLDDAALSIAGVSLVNLQLLSSRSRRETKTRNFVSEMRFRAVTE
Sequences:
>Translated_131_residues MSAVNALLQAIFARLTGDAALMTLITGGVVDRLLPHAVLPCIVLGDLESRDYSTATEKAEEHFLSLQIWSDANGRKGAGE IAARVKNLLDDAALSIAGVSLVNLQLLSSRSRRETKTRNFVSEMRFRAVTE >Mature_130_residues SAVNALLQAIFARLTGDAALMTLITGGVVDRLLPHAVLPCIVLGDLESRDYSTATEKAEEHFLSLQIWSDANGRKGAGEI AARVKNLLDDAALSIAGVSLVNLQLLSSRSRRETKTRNFVSEMRFRAVTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14198; Mature: 14066
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVNALLQAIFARLTGDAALMTLITGGVVDRLLPHAVLPCIVLGDLESRDYSTATEKAE CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH EHFLSLQIWSDANGRKGAGEIAARVKNLLDDAALSIAGVSLVNLQLLSSRSRRETKTRNF HHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSEMRFRAVTE HHHHHHHHCCC >Mature Secondary Structure SAVNALLQAIFARLTGDAALMTLITGGVVDRLLPHAVLPCIVLGDLESRDYSTATEKAE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH EHFLSLQIWSDANGRKGAGEIAARVKNLLDDAALSIAGVSLVNLQLLSSRSRRETKTRNF HHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSEMRFRAVTE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA