Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888306
Identifier: 15888306
GI number: 15888306
Start: 951713
End: 952294
Strand: Direct
Name: 15888306
Synonym: Atu8141
Alternate gene names: NA
Gene position: 951713-952294 (Clockwise)
Preceding gene: 159184552
Following gene: 15888307
Centisome position: 33.49
GC content: 68.04
Gene sequence:
>582_bases ATGGCGGGCGAAGAATCGATTGCGGAGAACCGGCAGGAGGCGGAAGCTCTTTCCGAGGTGATGGGTGATCTCGAACGGCG CTCGGAGCGGTTCGGGGCGGCGCTGACCTCCGCCTTGCAGGCAGCGACGACGGGCGGCAAGGGGCTGGACGATGTGTTGC GCGGGCTCGGGCAGCGGCTGTCCGGCATTGCGCTTTCGGCTGGGCTGAAGCCGCTGGAGAACATGATCGGCAATGCCGTC GGCGGGCTGTTGAATGGCGGCGGGTCGCTCTTTGCCTTTGCCGAGGGAGGTGTTCCGGCGCGCGCCATCACGCCTTTTGC GGAGGGCGGGGTCGTTTCGAGCCCTGCCTTTTTCCCGATGGGCGGCGGGCTTGGACTGATGGGGGAAGCGGGGGCGGAGG CGATCCTGCCGCTGAAGCGTGGTTCGGACGGTGCTCTCGGTGTCGCCGCACCCTCGGGCGGCGGCGGGGCGCAGATCGTT TTTAACGTGACGGCCACCGATGCGGCAAGTTTCCGCAAAAGCGAAGGGCAGATCGCCGCGATGCTGGCGCGCAGCGTCGG GCGTGGCCAGCGGGGATTGTGA
Upstream 100 bases:
>100_bases ATGAAGTTGGGTTTTGAAAGGACTTGGGCTGAAGCAATGGTTTTTTAAAAAGCTGTTTCAGCACCATGCATTCCCCAGTT GAATCAGAAAGGCAAGCGCG
Downstream 100 bases:
>100_bases CGCAAGCGCTGCCCGCATCTCCCACGTCCCAACCAGCAAAACGAATCCAGGAACAACCACATGGTGGCATTTCATGAAGT GCGGTTTCCGCTGCGGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Gene Transfer Agent Like Protein; Tail Tape Measure Protein; PHage Minor Tail Protein H; Phage-Related Minor Tail Protein-Like; Phage-Related Minor Tail Protein-Like Protein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAV GGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIV FNVTATDAASFRKSEGQIAAMLARSVGRGQRGL
Sequences:
>Translated_193_residues MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAV GGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIV FNVTATDAASFRKSEGQIAAMLARSVGRGQRGL >Mature_192_residues AGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAVG GLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVF NVTATDAASFRKSEGQIAAMLARSVGRGQRGL
Specific function: Unknown
COG id: COG5281
COG function: function code S; Phage-related minor tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19072; Mature: 18941
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SGIALSAGLKPLENMIGNAVGGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPM HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCC GGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVFNVTATDAASFRKSEGQIAA CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHH MLARSVGRGQRGL HHHHHHCCCCCCC >Mature Secondary Structure AGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SGIALSAGLKPLENMIGNAVGGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPM HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCC GGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVFNVTATDAASFRKSEGQIAA CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHH MLARSVGRGQRGL HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA