Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15888306

Identifier: 15888306

GI number: 15888306

Start: 951713

End: 952294

Strand: Direct

Name: 15888306

Synonym: Atu8141

Alternate gene names: NA

Gene position: 951713-952294 (Clockwise)

Preceding gene: 159184552

Following gene: 15888307

Centisome position: 33.49

GC content: 68.04

Gene sequence:

>582_bases
ATGGCGGGCGAAGAATCGATTGCGGAGAACCGGCAGGAGGCGGAAGCTCTTTCCGAGGTGATGGGTGATCTCGAACGGCG
CTCGGAGCGGTTCGGGGCGGCGCTGACCTCCGCCTTGCAGGCAGCGACGACGGGCGGCAAGGGGCTGGACGATGTGTTGC
GCGGGCTCGGGCAGCGGCTGTCCGGCATTGCGCTTTCGGCTGGGCTGAAGCCGCTGGAGAACATGATCGGCAATGCCGTC
GGCGGGCTGTTGAATGGCGGCGGGTCGCTCTTTGCCTTTGCCGAGGGAGGTGTTCCGGCGCGCGCCATCACGCCTTTTGC
GGAGGGCGGGGTCGTTTCGAGCCCTGCCTTTTTCCCGATGGGCGGCGGGCTTGGACTGATGGGGGAAGCGGGGGCGGAGG
CGATCCTGCCGCTGAAGCGTGGTTCGGACGGTGCTCTCGGTGTCGCCGCACCCTCGGGCGGCGGCGGGGCGCAGATCGTT
TTTAACGTGACGGCCACCGATGCGGCAAGTTTCCGCAAAAGCGAAGGGCAGATCGCCGCGATGCTGGCGCGCAGCGTCGG
GCGTGGCCAGCGGGGATTGTGA

Upstream 100 bases:

>100_bases
ATGAAGTTGGGTTTTGAAAGGACTTGGGCTGAAGCAATGGTTTTTTAAAAAGCTGTTTCAGCACCATGCATTCCCCAGTT
GAATCAGAAAGGCAAGCGCG

Downstream 100 bases:

>100_bases
CGCAAGCGCTGCCCGCATCTCCCACGTCCCAACCAGCAAAACGAATCCAGGAACAACCACATGGTGGCATTTCATGAAGT
GCGGTTTCCGCTGCGGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Gene Transfer Agent Like Protein; Tail Tape Measure Protein; PHage Minor Tail Protein H; Phage-Related Minor Tail Protein-Like; Phage-Related Minor Tail Protein-Like Protein

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAV
GGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIV
FNVTATDAASFRKSEGQIAAMLARSVGRGQRGL

Sequences:

>Translated_193_residues
MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAV
GGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIV
FNVTATDAASFRKSEGQIAAMLARSVGRGQRGL
>Mature_192_residues
AGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRLSGIALSAGLKPLENMIGNAVG
GLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPMGGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVF
NVTATDAASFRKSEGQIAAMLARSVGRGQRGL

Specific function: Unknown

COG id: COG5281

COG function: function code S; Phage-related minor tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19072; Mature: 18941

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGIALSAGLKPLENMIGNAVGGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPM
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCC
GGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVFNVTATDAASFRKSEGQIAA
CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHH
MLARSVGRGQRGL
HHHHHHCCCCCCC
>Mature Secondary Structure 
AGEESIAENRQEAEALSEVMGDLERRSERFGAALTSALQAATTGGKGLDDVLRGLGQRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGIALSAGLKPLENMIGNAVGGLLNGGGSLFAFAEGGVPARAITPFAEGGVVSSPAFFPM
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCC
GGGLGLMGEAGAEAILPLKRGSDGALGVAAPSGGGGAQIVFNVTATDAASFRKSEGQIAA
CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHH
MLARSVGRGQRGL
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA