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The map label for this gene is ycgN [C]

Identifier: 159184535

GI number: 159184535

Start: 922698

End: 923177

Strand: Direct

Name: ycgN [C]

Synonym: Atu0932

Alternate gene names: 159184535

Gene position: 922698-923177 (Clockwise)

Preceding gene: 159184533

Following gene: 159184536

Centisome position: 32.47

GC content: 61.67

Gene sequence:

>480_bases
ATGAATGACGCGCCGTTCTGGAAAACCAAATCCCTCACGGAGATGACCGGCGAGGAATGGGAAAGCCTGTGCGACGGCTG
CGGCCTGTGCTGTCTCAACAAACTCGAGGACTGGGACACCGGCGAAGTGGTGTTCACCTCGGTTCGCTGCGTGCTGCTGG
ATGGCGAGAGCTGTCGATGCTCCGACTACGAGAACCGCCGCGCCACCGTGCCGGACTGTATCCAGCTTGACCTGAAGAAG
GTGCATGAGATCGGCTGGCTGCCGCCCACCTGCGCCTATGCGCTGGTGCGCGACGGCAAGGATCTCTACTGGTGGCATTA
TCTCGTCTCCGGCGATATCGAGACGGTGCATGAGGCCGGCATTTCCGCGCGTGGGCGCACCGTCAGCGAGGCCCATGTGG
ATGTTGACGACTTCGAGGATTATGTGGTGGACTGGCCCCTGACAGTGGGTGAGAAGGCGGGCGAAAAGCAGCGGACCTGA

Upstream 100 bases:

>100_bases
AAATATCGTACAAACCAGCCCTTGGCGATACGATATAAAGGATTAGGGACCGGTTAAACACTCCCGTCCAAGAGATCAAA
ATGAAACGGAAATGTTAACG

Downstream 100 bases:

>100_bases
CGGAAAAGGTCCATTTTCGTTTTGGTCCTATTCCTGCCCCATCCGTTACCTAAACCGCTCCGACCATTCCGGCAAATGAT
CCGCAAAAGCGGACAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNDAPFWKTKSLTEMTGEEWESLCDGCGLCCLNKLEDWDTGEVVFTSVRCVLLDGESCRCSDYENRRATVPDCIQLDLKK
VHEIGWLPPTCAYALVRDGKDLYWWHYLVSGDIETVHEAGISARGRTVSEAHVDVDDFEDYVVDWPLTVGEKAGEKQRT

Sequences:

>Translated_159_residues
MNDAPFWKTKSLTEMTGEEWESLCDGCGLCCLNKLEDWDTGEVVFTSVRCVLLDGESCRCSDYENRRATVPDCIQLDLKK
VHEIGWLPPTCAYALVRDGKDLYWWHYLVSGDIETVHEAGISARGRTVSEAHVDVDDFEDYVVDWPLTVGEKAGEKQRT
>Mature_159_residues
MNDAPFWKTKSLTEMTGEEWESLCDGCGLCCLNKLEDWDTGEVVFTSVRCVLLDGESCRCSDYENRRATVPDCIQLDLKK
VHEIGWLPPTCAYALVRDGKDLYWWHYLVSGDIETVHEAGISARGRTVSEAHVDVDDFEDYVVDWPLTVGEKAGEKQRT

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=146, Percent_Identity=47.2602739726027, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y932_AGRT5 (Q8UGV3)

Other databases:

- EMBL:   AE007869
- PIR:   AD2691
- PIR:   H97472
- RefSeq:   NP_353952.2
- STRING:   Q8UGV3
- GeneID:   1132970
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0932
- eggNOG:   COG2983
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- PhylomeDB:   Q8UGV3
- ProtClustDB:   PRK05170
- BioCyc:   ATUM176299-1:ATU0932-MONOMER
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 18041; Mature: 18041

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAPFWKTKSLTEMTGEEWESLCDGCGLCCLNKLEDWDTGEVVFTSVRCVLLDGESCRC
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC
SDYENRRATVPDCIQLDLKKVHEIGWLPPTCAYALVRDGKDLYWWHYLVSGDIETVHEAG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHCC
ISARGRTVSEAHVDVDDFEDYVVDWPLTVGEKAGEKQRT
CCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDAPFWKTKSLTEMTGEEWESLCDGCGLCCLNKLEDWDTGEVVFTSVRCVLLDGESCRC
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC
SDYENRRATVPDCIQLDLKKVHEIGWLPPTCAYALVRDGKDLYWWHYLVSGDIETVHEAG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHCC
ISARGRTVSEAHVDVDDFEDYVVDWPLTVGEKAGEKQRT
CCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194