Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184531
Identifier: 159184531
GI number: 159184531
Start: 911938
End: 912882
Strand: Reverse
Name: 159184531
Synonym: Atu0923
Alternate gene names: NA
Gene position: 912882-911938 (Counterclockwise)
Preceding gene: 159184532
Following gene: 15888258
Centisome position: 32.13
GC content: 61.8
Gene sequence:
>945_bases GTGGTGCTTATGGCCACGGTGACGAATTTCGAGTCTGTGTCCCATCCGTCAAAAACGGACCTCCGGCAGTTCGCCGAACT TTTCATGCCGCTTTTCAACGCCTCCACCGAAGAAGCCAAGCGCGAGGCCATCGCCGCGCTCTCGCAGCATCCGAGCGTGC CTTCGGCCGTCGCCTTCTTCATTGCCTGCCAGCCGATTTCGCTTTCGGCACCCTTCCTCATCTCCTCCAAATGCCTTGAC GATGACACGCTGATCACCATTGCCCGCACGCAAGGGGCAGCCCATGCGCGCACCATCGTGCGGCGTGAAGACCTCTCCCC CACCGTCATCGATGCGCTTGTCGGGCTTCGCCATGCCGAAGATCTGAAACGGCCGGACGATCAGGCTGACGTCGCCGAAC CGCAGGCGGTAGCAAATCCTGAAAAGCCAAAAGCGGAAGAAAAGACCGACAACATCGCCGCCGCTTCCGCATTCGAAGAA GAAATGCGCCGGCGCATCAAGCAGATGGCGCATCACCTCAACCGCCCGGAAAACGATATTCTCGGCCTTCGCCGCCTGAG CGAGGTGCAGGAAGCGCTGCTCGTGCGTTTCGCGCGTGAACGCAACGCCCGGCAATTTGCGGTGGCGCTGGCGGACTCTC TCTCCTCCAGCTACTGGCTGTCGGAGCGCATCATGCTAGATATATCAGGCGTGCAGTTGGCCACGACGCTGACCGGCCTC GGAATGGAGTTTTCCGAAGCGGCCTTCGTGCTGCAATGCTTCTATCCGCATCTTTCCGCCGCCGAAGGCGACATGAGCCG TGCGGAAGCCCTGCTCGACGGCCTCGACGTCGTGCAGTGCGAAGAGCGGCTGGAAAGCTGGCGGCGCGCCGACAGCTATA CACATGGCCGCGAACGACCAAGCCACAGCGCACCGGCCACGCAGAGAACCGGGACGCAGGGTTAG
Upstream 100 bases:
>100_bases GCTCTAATTTGAGCCGATATTGTGTTTGCGTTTGTTGGGTAGTGCGTTGACCGACCGGTTTCGAGAACTTGAGAGGCCAA GAGCCATTAGGAAGAAAGAT
Downstream 100 bases:
>100_bases GCAGGCTGGCCCCGCATCTTCACGGGTTGAAGAGGCATGCCCTGGACCGGGCAGTTCTAGGCCTGCGGCTGGTCCACCAG CGTCAGCAGGGTTCCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MVLMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFFIACQPISLSAPFLISSKCLD DDTLITIARTQGAAHARTIVRREDLSPTVIDALVGLRHAEDLKRPDDQADVAEPQAVANPEKPKAEEKTDNIAAASAFEE EMRRRIKQMAHHLNRPENDILGLRRLSEVQEALLVRFARERNARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGL GMEFSEAAFVLQCFYPHLSAAEGDMSRAEALLDGLDVVQCEERLESWRRADSYTHGRERPSHSAPATQRTGTQG
Sequences:
>Translated_314_residues MVLMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFFIACQPISLSAPFLISSKCLD DDTLITIARTQGAAHARTIVRREDLSPTVIDALVGLRHAEDLKRPDDQADVAEPQAVANPEKPKAEEKTDNIAAASAFEE EMRRRIKQMAHHLNRPENDILGLRRLSEVQEALLVRFARERNARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGL GMEFSEAAFVLQCFYPHLSAAEGDMSRAEALLDGLDVVQCEERLESWRRADSYTHGRERPSHSAPATQRTGTQG >Mature_314_residues MVLMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFFIACQPISLSAPFLISSKCLD DDTLITIARTQGAAHARTIVRREDLSPTVIDALVGLRHAEDLKRPDDQADVAEPQAVANPEKPKAEEKTDNIAAASAFEE EMRRRIKQMAHHLNRPENDILGLRRLSEVQEALLVRFARERNARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGL GMEFSEAAFVLQCFYPHLSAAEGDMSRAEALLDGLDVVQCEERLESWRRADSYTHGRERPSHSAPATQRTGTQG
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34715; Mature: 34715
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFF CEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH IACQPISLSAPFLISSKCLDDDTLITIARTQGAAHARTIVRREDLSPTVIDALVGLRHAE HHCCCCCCCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH DLKRPDDQADVAEPQAVANPEKPKAEEKTDNIAAASAFEEEMRRRIKQMAHHLNRPENDI HHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LGLRRLSEVQEALLVRFARERNARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHC GMEFSEAAFVLQCFYPHLSAAEGDMSRAEALLDGLDVVQCEERLESWRRADSYTHGRERP CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC SHSAPATQRTGTQG CCCCCCCCCCCCCC >Mature Secondary Structure MVLMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFF CEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH IACQPISLSAPFLISSKCLDDDTLITIARTQGAAHARTIVRREDLSPTVIDALVGLRHAE HHCCCCCCCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH DLKRPDDQADVAEPQAVANPEKPKAEEKTDNIAAASAFEEEMRRRIKQMAHHLNRPENDI HHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LGLRRLSEVQEALLVRFARERNARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHC GMEFSEAAFVLQCFYPHLSAAEGDMSRAEALLDGLDVVQCEERLESWRRADSYTHGRERP CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC SHSAPATQRTGTQG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA