Click here to switch to the map view.

The map label for this gene is uspF [H]

Identifier: 159184525

GI number: 159184525

Start: 895877

End: 896287

Strand: Direct

Name: uspF [H]

Synonym: Atu0904

Alternate gene names: 159184525

Gene position: 895877-896287 (Clockwise)

Preceding gene: 15888240

Following gene: 159184526

Centisome position: 31.53

GC content: 59.12

Gene sequence:

>411_bases
ATGTACAAGAAGATCATCGTACCGGTAGACCTCAGCGCCACCGACAAGGGGGAAAAGATCCTCGAAAAGGCCAAGGCGCT
GCTGGACCCCGACGGCGAGATCGTTCTCATCAACGTGGTGGAGGAACTGCCGGGGTATATGGCGATCGACCTGCCTGTCG
ACCTTATCGAAAACGCCATCAAGGACGCCAAGGCGAAGCTTTCAGACCTCAAGACCAAGGCCGGTTTCAAGGGCAGTCAG
GAAATCAGAAGCGGCGCCCCCGCACGCGAGATCATCGCCGCCGCCGAGGAACACAAGGCGGATCTCATCATTATCGCGTC
GCACACGCCTGACTTCAGCAATTATTTCATCGGCGCCACCGCCGACCGCGTGGTGCGCCACGCCAAGTGCTCGGTGCTGG
TGGATCGGTAA

Upstream 100 bases:

>100_bases
GCTGCGGCTTTGACTTCGATCAAGGCAAAGGTGGCGCCGCCGGAGAAATATGAGCCTAACCCGACACGCGAAATGGCGGA
TCAAGCCAAAGGAGACAGCC

Downstream 100 bases:

>100_bases
GAGTTTGACGTTTTAGGGTTGCAGGCGGTTTTCCCGCCCCCCCCCCAAGCATTTCCAGGAAAAGTGGAAGCCGGTTTTCC
TGGAAATGCGACAAAACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MYKKIIVPVDLSATDKGEKILEKAKALLDPDGEIVLINVVEELPGYMAIDLPVDLIENAIKDAKAKLSDLKTKAGFKGSQ
EIRSGAPAREIIAAAEEHKADLIIIASHTPDFSNYFIGATADRVVRHAKCSVLVDR

Sequences:

>Translated_136_residues
MYKKIIVPVDLSATDKGEKILEKAKALLDPDGEIVLINVVEELPGYMAIDLPVDLIENAIKDAKAKLSDLKTKAGFKGSQ
EIRSGAPAREIIAAAEEHKADLIIIASHTPDFSNYFIGATADRVVRHAKCSVLVDR
>Mature_136_residues
MYKKIIVPVDLSATDKGEKILEKAKALLDPDGEIVLINVVEELPGYMAIDLPVDLIENAIKDAKAKLSDLKTKAGFKGSQ
EIRSGAPAREIIAAAEEHKADLIIIASHTPDFSNYFIGATADRVVRHAKCSVLVDR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=145, Percent_Identity=33.1034482758621, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786824, Length=145, Percent_Identity=33.1034482758621, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 14766; Mature: 14766

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKIIVPVDLSATDKGEKILEKAKALLDPDGEIVLINVVEELPGYMAIDLPVDLIENAI
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCEEEEECCHHHHHHHH
KDAKAKLSDLKTKAGFKGSQEIRSGAPAREIIAAAEEHKADLIIIASHTPDFSNYFIGAT
HHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC
ADRVVRHAKCSVLVDR
HHHHHHHHHHEEEECC
>Mature Secondary Structure
MYKKIIVPVDLSATDKGEKILEKAKALLDPDGEIVLINVVEELPGYMAIDLPVDLIENAI
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCEEEEECCHHHHHHHH
KDAKAKLSDLKTKAGFKGSQEIRSGAPAREIIAAAEEHKADLIIIASHTPDFSNYFIGAT
HHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC
ADRVVRHAKCSVLVDR
HHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]