Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184511
Identifier: 159184511
GI number: 159184511
Start: 873564
End: 874415
Strand: Direct
Name: 159184511
Synonym: Atu0877
Alternate gene names: NA
Gene position: 873564-874415 (Clockwise)
Preceding gene: 15888217
Following gene: 159184513
Centisome position: 30.74
GC content: 58.69
Gene sequence:
>852_bases ATGACTGAAAAAAGCACACCCCTCTTCTCCTTCGGCATTGTCGCCGATCCCCAATATGCCGACGCCGATCCCCGCCCGGA TATGGGCCGTTATTATGCCGAAAGCCCGAAAAAGCTGGCTGAGGCGATCAATGTCTTCAACAGCGAGGACCTCGCCTTCG TGGTGACGCTCGGCGATATCATCGATCGCGGCTTTGAAAATTTCGATGCGATCCTCAGCGTTTATGACGCGCTTCGCCAC CCCTCGGTGCTGCTGCCGGGCAATCACGATTTCGCCGTCGCCCCCGAGCATCTTTCCGCCATCCACGCCCGCCTCGGCAT GAAGGCCCCCTGGCATGATTTTGCCATGAGCGGCATCCGCTTCGTCGTGCTTGACGGCAACGATGTCAGCCTCTTCGCCC CGCCACCTGATGATCCGCGCCGCCTGGTCGCGCAGGAGCGGTTGAAGCGCCTCTGGGATGTCGATGCGATCAATGCGCAG GACTGGAACGCCTCACTCAGTGACAAGCAATTCGAATGGTTGCGCACCATTCTGCAACAGGCGGATGCGGCCGGCGAAAG AGTAATCGTGCTGTGCCACTATCCCGTCTATCCGGAAAACGCCCACAACATGTGGGATGCGCCGCGCATCCTTGATCTTC TCGGTTCTCACTCCTCCGTTGCCGCATGGTTCAACGGCCATAATCACGAGGGTAATTACGGGACGCTCGGCACCACCCAC TTCGTCAATTTCAAGGGCATGGTGGATACGCCCGACCAGAACACCTTTGCCATCGCCGATGTCTTCGCCGATCGGATCGC GATTCGCGGTTTTGGACGCGAGGAGGATCGGGTGTTGCAGTACTTACGGTAA
Upstream 100 bases:
>100_bases GGAATTTTTCGAACACCCGGCCTTCGTGCCGGGTGTTCTGCTTTTGGCATGTCGCGCGGTGTCACAAGCCTGTCATCAGC CGGGTTTATCGCGGCGCATC
Downstream 100 bases:
>100_bases AGTGACGCCTGAGATCGGCCGCCCCAACTCTCCACCCGGCTGGCCGCTCTGCCAGCCGCTCATCCACAATCGCCGCAGCT TCTCGCCTTCCATCTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Phosphatase Protein; Calcineurin-Like Phosphoesterase
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTEKSTPLFSFGIVADPQYADADPRPDMGRYYAESPKKLAEAINVFNSEDLAFVVTLGDIIDRGFENFDAILSVYDALRH PSVLLPGNHDFAVAPEHLSAIHARLGMKAPWHDFAMSGIRFVVLDGNDVSLFAPPPDDPRRLVAQERLKRLWDVDAINAQ DWNASLSDKQFEWLRTILQQADAAGERVIVLCHYPVYPENAHNMWDAPRILDLLGSHSSVAAWFNGHNHEGNYGTLGTTH FVNFKGMVDTPDQNTFAIADVFADRIAIRGFGREEDRVLQYLR
Sequences:
>Translated_283_residues MTEKSTPLFSFGIVADPQYADADPRPDMGRYYAESPKKLAEAINVFNSEDLAFVVTLGDIIDRGFENFDAILSVYDALRH PSVLLPGNHDFAVAPEHLSAIHARLGMKAPWHDFAMSGIRFVVLDGNDVSLFAPPPDDPRRLVAQERLKRLWDVDAINAQ DWNASLSDKQFEWLRTILQQADAAGERVIVLCHYPVYPENAHNMWDAPRILDLLGSHSSVAAWFNGHNHEGNYGTLGTTH FVNFKGMVDTPDQNTFAIADVFADRIAIRGFGREEDRVLQYLR >Mature_282_residues TEKSTPLFSFGIVADPQYADADPRPDMGRYYAESPKKLAEAINVFNSEDLAFVVTLGDIIDRGFENFDAILSVYDALRHP SVLLPGNHDFAVAPEHLSAIHARLGMKAPWHDFAMSGIRFVVLDGNDVSLFAPPPDDPRRLVAQERLKRLWDVDAINAQD WNASLSDKQFEWLRTILQQADAAGERVIVLCHYPVYPENAHNMWDAPRILDLLGSHSSVAAWFNGHNHEGNYGTLGTTHF VNFKGMVDTPDQNTFAIADVFADRIAIRGFGREEDRVLQYLR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI94158594, Length=330, Percent_Identity=27.5757575757576, Blast_Score=123, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31808; Mature: 31677
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKSTPLFSFGIVADPQYADADPRPDMGRYYAESPKKLAEAINVFNSEDLAFVVTLGDI CCCCCCCEEEECEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHH IDRGFENFDAILSVYDALRHPSVLLPGNHDFAVAPEHLSAIHARLGMKAPWHDFAMSGIR HHHCHHHHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHHHHHCCCCCHHHHHHCCEE FVVLDGNDVSLFAPPPDDPRRLVAQERLKRLWDVDAINAQDWNASLSDKQFEWLRTILQQ EEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH ADAAGERVIVLCHYPVYPENAHNMWDAPRILDLLGSHSSVAAWFNGHNHEGNYGTLGTTH HCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEE FVNFKGMVDTPDQNTFAIADVFADRIAIRGFGREEDRVLQYLR EEEECCEEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHC >Mature Secondary Structure TEKSTPLFSFGIVADPQYADADPRPDMGRYYAESPKKLAEAINVFNSEDLAFVVTLGDI CCCCCCEEEECEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHH IDRGFENFDAILSVYDALRHPSVLLPGNHDFAVAPEHLSAIHARLGMKAPWHDFAMSGIR HHHCHHHHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHHHHHCCCCCHHHHHHCCEE FVVLDGNDVSLFAPPPDDPRRLVAQERLKRLWDVDAINAQDWNASLSDKQFEWLRTILQQ EEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH ADAAGERVIVLCHYPVYPENAHNMWDAPRILDLLGSHSSVAAWFNGHNHEGNYGTLGTTH HCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEE FVNFKGMVDTPDQNTFAIADVFADRIAIRGFGREEDRVLQYLR EEEECCEEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA