Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pat [H]
Identifier: 159184510
GI number: 159184510
Start: 871736
End: 872278
Strand: Direct
Name: pat [H]
Synonym: Atu0874
Alternate gene names: 159184510
Gene position: 871736-872278 (Clockwise)
Preceding gene: 15888213
Following gene: 15888217
Centisome position: 30.68
GC content: 61.88
Gene sequence:
>543_bases ATGACCCTTTCCACCGTTTCCAGCCTTTTAATCCGCCCCTGTGAGGAGGCGGATATTCCAGCCATTACCGAAATTTACCG GGATGCCGTTTTGCATGGCCGCGCCAGCTTCGAGATCGATCCGCCTGATGTGGCGACCATGGCCGAGCGCCGCCGCCTGC TGGTGGAGGGCAATTACCCCTATCTCGTCGCCGAACACGATGGCAAGGTAGCCGGATATGCCTATGCCGGCGCCTATCGC GCCCGCCCGGCCTATGGCGCGACAGTCGAGGATTCCGTTTATATCGATCCGGCCATGAAGGGCACGGGCATCGGCCGCAA ACTGCTCGATGCGCTGATCGCGGAAGCCACCGCGCGTGGCTTCCGGCAGATGATCGCCGTCATCGGCGATAGCGCCAATG CGGCTTCGGTCGGCGTGCACCGCGCTGCCGGTTTCGAACTTGTCGGCACCTTCAAATCCATCGGCTGGAAACATGGCCAA TGGCTGAATACGGTGCTGATGCAGCGGGCCTTGGGCGAGGGCGATACCACGCCGCGTTTCTAA
Upstream 100 bases:
>100_bases TCATCAAAGAAAACCTTATCGTTTGTATAAGACAGATAATCTTTATTTTGGCTGCGCCGCAATGCACAATGAGGGCGTGA ATGATCCGCAGGACAAGAGA
Downstream 100 bases:
>100_bases GTCTTTCAGGGCTTTGTGGAGCCGGGGATTTCCACCTTCAGCGTGTCGCCGGCAAGCTCGCTGCCCAGCTCCACGGCCTT GGTCTTCTTGTCGTAGACGC
Product: acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTLSTVSSLLIRPCEEADIPAITEIYRDAVLHGRASFEIDPPDVATMAERRRLLVEGNYPYLVAEHDGKVAGYAYAGAYR ARPAYGATVEDSVYIDPAMKGTGIGRKLLDALIAEATARGFRQMIAVIGDSANAASVGVHRAAGFELVGTFKSIGWKHGQ WLNTVLMQRALGEGDTTPRF
Sequences:
>Translated_180_residues MTLSTVSSLLIRPCEEADIPAITEIYRDAVLHGRASFEIDPPDVATMAERRRLLVEGNYPYLVAEHDGKVAGYAYAGAYR ARPAYGATVEDSVYIDPAMKGTGIGRKLLDALIAEATARGFRQMIAVIGDSANAASVGVHRAAGFELVGTFKSIGWKHGQ WLNTVLMQRALGEGDTTPRF >Mature_179_residues TLSTVSSLLIRPCEEADIPAITEIYRDAVLHGRASFEIDPPDVATMAERRRLLVEGNYPYLVAEHDGKVAGYAYAGAYRA RPAYGATVEDSVYIDPAMKGTGIGRKLLDALIAEATARGFRQMIAVIGDSANAASVGVHRAAGFELVGTFKSIGWKHGQW LNTVLMQRALGEGDTTPRF
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=166, Percent_Identity=40.3614457831325, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 19443; Mature: 19312
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSTVSSLLIRPCEEADIPAITEIYRDAVLHGRASFEIDPPDVATMAERRRLLVEGNYP CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCEEEEECCCC YLVAEHDGKVAGYAYAGAYRARPAYGATVEDSVYIDPAMKGTGIGRKLLDALIAEATARG EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH FRQMIAVIGDSANAASVGVHRAAGFELVGTFKSIGWKHGQWLNTVLMQRALGEGDTTPRF HHHHHHHHCCCCCCHHHCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLSTVSSLLIRPCEEADIPAITEIYRDAVLHGRASFEIDPPDVATMAERRRLLVEGNYP CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCEEEEECCCC YLVAEHDGKVAGYAYAGAYRARPAYGATVEDSVYIDPAMKGTGIGRKLLDALIAEATARG EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH FRQMIAVIGDSANAASVGVHRAAGFELVGTFKSIGWKHGQWLNTVLMQRALGEGDTTPRF HHHHHHHHCCCCCCHHHCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA