Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is mcpC [H]

Identifier: 15888213

GI number: 15888213

Start: 868168

End: 870525

Strand: Direct

Name: mcpC [H]

Synonym: Atu0872

Alternate gene names: 15888213

Gene position: 868168-870525 (Clockwise)

Preceding gene: 159184508

Following gene: 159184510

Centisome position: 30.55

GC content: 63.74

Gene sequence:

>2358_bases
ATGTCTTTCAGCATTCGTAATATACTTGTTGGTTTTTTCCTCACCATCAGCCTTGCACTTGCCGGTTTCGTCGGCACGCA
ATCGTGGCGCTCGGTCAATCGCGCCAGCGCCTTTTCCGAGGTCGCGCAGCTCGTCTCGCTGGACAAGCTTCTTTTCAACG
CACTCCTGAATTTCCGCAGTGAACGTGGCGACAGCGCCACGGCGCTGACGCTCGATCCATCGAAGTCGGCTGGCAGCATC
GCCAGTGTTGCGGCGGCACGCCAGAAGGTGGATGCCGCCATGACGGCATTCCTCACACAGTCTTCGTCGCTTGAAGATGC
CAGGCTGCAAGGGCCGCTCAAACGCGTAAAGGATGTCTACGCACAGTTCGTTGAACTGCGAAAGAAGGTCGACGCCAATG
TCTCGCAGCCGCTCGACCGGCGCGAGGGCGGTCTCGACAAGACCGTCATGACGCTCGGTGGCGATTTCCTCGCCTCGCTG
GAAGCGGGTTCGACGGCGCTGGAGGGGGCTGTCCGCTCTCTCGATCAGGGCCAGACCGGTCTCATCCAGCTGCGCTCTTA
CGGCTGGTCCGCCCGTGCGCTTGGCGGCAGCGCCACCGTTGTCCTCAACGCCGCCGTGGCGCAGAACCGGCCGCTCACCG
CCCAGGAAATGCAGCAGCTCGGTGCCTTCGATGCCGGCGCGGCATTTGCGTGGAAGGCGACGGGTGATCTCGTCGCGCAT
GAATCAACGCCGCAATCGCTCAAGGACATCTACGCCACTGCGGACAAGACCTATTTCAAGGGCGATTTCAACACTCAGCG
CACCAAGCTCATCGAAGACCTCAACAATGGCCGCACGCCGACCTTTACCTTGGACAGCTGGCGCACCACCGTTACGGAAA
ATCTCGGCACGATTGCCAAGATCGCCTCTGCCGCCATGGATGTCCTCGATGCCAATGCCGAAAAGGCAAAACAGGACGCC
TTTATCGGTTCGGTGGTCTATCTGGCGGTCTTCATAGCCACACTGGCGCTCTGCATTGTCTCGCTCGCCGTCATCGTCGG
CCGCGTCACCCGGCCGATCAGCCGCCTGACCAATGCGATGATGGCGCTTTCGGGCGGCAATCTTGCAATCGATATCGCCG
GCGCAAAGCGCGGCGACGAGATCGGCGAGATGGCCCGTGCCGTGGAAGTCTTCCGCGAGGCGGCCATCCGCAACCGGCAG
CTGGAGGCGGACGCCGTCGCCAACCGGGAGCAGGCCGAACGCGACCGCATCGAGCTGCAGCAGCGCGCTGAGGCCGAGGC
CGAAGAACGGCTCAACCAGGCCACGGGTTCGCTGGCGGGCGGTCTTCGCCGTCTCGCCTCCGGTGACATGGTCTGCGAGA
TCGCCACGCCGTTCGCACCGCAATTCGAAGCGCTGCGGCACGATTTCAACAGCTCCGTGCATCAGCTGCGTGAGGCGCTG
ACGAGTGTCGGCCAGTCCGTGCAGACGGTGAATGGCGGCGCCCACGAGGTTTCCTCGGCCTCCGACGATCTTTCCCGCCG
CACCGAACAGCAGGCCGCTTCGCTTGAAGAGACTGCGGCGGCACTGGAAGAGATCACCGCCAATGTCTCCGCCACCTCCA
AGCGGGCTGGCGAGGCCCGGGACACGGTGCGGGAAGCAAGGACCAAGGCCGATCTTTCCGGCAAGGTGGTGCGCGATGCT
GTCGCCGCCATGGAACGCATCGAACATTCCTCGCGCCAGATCGGCCAGATCATCGGCGTCATCGACGAAATCGCCTTCCA
GACCAACCTTCTGGCGCTGAATGCGGGCGTCGAGGCGGCAAGGGCGGGCGATGCCGGCAAGGGCTTTGCCGTCGTTGCGC
AGGAAGTTCGCGAACTGGCGCAGCGTTCCGCCAATGCGGCGAAGGAAATCAAGCAGCTCATCAACACCTCAGCCGTTGCG
GTAGGTGAGGGCGTGAAGCTGGTTGCCGATACCGGCGTCGGGCTTTCCGAAATCGAGCAGCTGGTGCTGTCCGTCAACAG
CCATATGGACGCCATCGCCACGGCGGCGCAGGAACAGTCTGCCGGTCTCTCCGAGGTCAATACCGCCGTCAACCACATGG
ATCAGGCCACGCAGCAGAACGCCGCCATGGTCGAGGAAATGAATGCGGCCGGTGCCGGTCTCGCGCAGGAATGCGCCAAT
CTCCAGGCCCTGCTTGCGCAGTTCCAGCTCGGCCAGCAGGCCTCGGCATTGCGGGAGACGGCACGGCATATGCAACGCGT
CGCAAACCCTTCGCGCGCTCCGGCCGCACCCGTCGCAGCACCGCCACGGGCCCGTCCCGTTGCCACGCGCGGCAACGCGG
CGCTAGCCGTGAAGGGTGATGACTGGACGGAGTTCTGA

Upstream 100 bases:

>100_bases
CGCAAAAAAATCCCCAAAAAGATGGGGGAGTTTAATCCAATTTTAGACAAGCTTATTTTAGTTTGCGGCATCTTCATTTC
CGGCTAGCGGGGGCCGCCAG

Downstream 100 bases:

>100_bases
GGTTCGGAAGCTACGCCCGCGTCATCGAATGGCGCGGGCTACGTTGTTAACGAGGCTTTCTCCACCCGCAACGTCATCCT
CAGGCTTGTCCCGAGGATCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 785; Mature: 784

Protein sequence:

>785_residues
MSFSIRNILVGFFLTISLALAGFVGTQSWRSVNRASAFSEVAQLVSLDKLLFNALLNFRSERGDSATALTLDPSKSAGSI
ASVAAARQKVDAAMTAFLTQSSSLEDARLQGPLKRVKDVYAQFVELRKKVDANVSQPLDRREGGLDKTVMTLGGDFLASL
EAGSTALEGAVRSLDQGQTGLIQLRSYGWSARALGGSATVVLNAAVAQNRPLTAQEMQQLGAFDAGAAFAWKATGDLVAH
ESTPQSLKDIYATADKTYFKGDFNTQRTKLIEDLNNGRTPTFTLDSWRTTVTENLGTIAKIASAAMDVLDANAEKAKQDA
FIGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAMMALSGGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQ
LEADAVANREQAERDRIELQQRAEAEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREAL
TSVGQSVQTVNGGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEARDTVREARTKADLSGKVVRDA
VAAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSANAAKEIKQLINTSAVA
VGEGVKLVADTGVGLSEIEQLVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAGLAQECAN
LQALLAQFQLGQQASALRETARHMQRVANPSRAPAAPVAAPPRARPVATRGNAALAVKGDDWTEF

Sequences:

>Translated_785_residues
MSFSIRNILVGFFLTISLALAGFVGTQSWRSVNRASAFSEVAQLVSLDKLLFNALLNFRSERGDSATALTLDPSKSAGSI
ASVAAARQKVDAAMTAFLTQSSSLEDARLQGPLKRVKDVYAQFVELRKKVDANVSQPLDRREGGLDKTVMTLGGDFLASL
EAGSTALEGAVRSLDQGQTGLIQLRSYGWSARALGGSATVVLNAAVAQNRPLTAQEMQQLGAFDAGAAFAWKATGDLVAH
ESTPQSLKDIYATADKTYFKGDFNTQRTKLIEDLNNGRTPTFTLDSWRTTVTENLGTIAKIASAAMDVLDANAEKAKQDA
FIGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAMMALSGGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQ
LEADAVANREQAERDRIELQQRAEAEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREAL
TSVGQSVQTVNGGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEARDTVREARTKADLSGKVVRDA
VAAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSANAAKEIKQLINTSAVA
VGEGVKLVADTGVGLSEIEQLVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAGLAQECAN
LQALLAQFQLGQQASALRETARHMQRVANPSRAPAAPVAAPPRARPVATRGNAALAVKGDDWTEF
>Mature_784_residues
SFSIRNILVGFFLTISLALAGFVGTQSWRSVNRASAFSEVAQLVSLDKLLFNALLNFRSERGDSATALTLDPSKSAGSIA
SVAAARQKVDAAMTAFLTQSSSLEDARLQGPLKRVKDVYAQFVELRKKVDANVSQPLDRREGGLDKTVMTLGGDFLASLE
AGSTALEGAVRSLDQGQTGLIQLRSYGWSARALGGSATVVLNAAVAQNRPLTAQEMQQLGAFDAGAAFAWKATGDLVAHE
STPQSLKDIYATADKTYFKGDFNTQRTKLIEDLNNGRTPTFTLDSWRTTVTENLGTIAKIASAAMDVLDANAEKAKQDAF
IGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAMMALSGGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQL
EADAVANREQAERDRIELQQRAEAEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREALT
SVGQSVQTVNGGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEARDTVREARTKADLSGKVVRDAV
AAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSANAAKEIKQLINTSAVAV
GEGVKLVADTGVGLSEIEQLVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAGLAQECANL
QALLAQFQLGQQASALRETARHMQRVANPSRAPAAPVAAPPRARPVATRGNAALAVKGDDWTEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=299, Percent_Identity=43.8127090301003, Blast_Score=198, Evalue=1e-51,
Organism=Escherichia coli, GI2367378, Length=320, Percent_Identity=44.6875, Blast_Score=196, Evalue=5e-51,
Organism=Escherichia coli, GI1787690, Length=293, Percent_Identity=41.9795221843003, Blast_Score=195, Evalue=1e-50,
Organism=Escherichia coli, GI1788195, Length=325, Percent_Identity=40.9230769230769, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1789453, Length=230, Percent_Identity=39.1304347826087, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 83140; Mature: 83009

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50885 HAMP ; PS50906 NIT ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSIRNILVGFFLTISLALAGFVGTQSWRSVNRASAFSEVAQLVSLDKLLFNALLNFRS
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGDSATALTLDPSKSAGSIASVAAARQKVDAAMTAFLTQSSSLEDARLQGPLKRVKDVY
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AQFVELRKKVDANVSQPLDRREGGLDKTVMTLGGDFLASLEAGSTALEGAVRSLDQGQTG
HHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCC
LIQLRSYGWSARALGGSATVVLNAAVAQNRPLTAQEMQQLGAFDAGAAFAWKATGDLVAH
HHHHHHCCCCHHCCCCCEEEEEEHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEC
ESTPQSLKDIYATADKTYFKGDFNTQRTKLIEDLNNGRTPTFTLDSWRTTVTENLGTIAK
CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
IASAAMDVLDANAEKAKQDAFIGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALSGGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQLEADAVANREQAERDRIELQ
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHH
QRAEAEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
TSVGQSVQTVNGGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEAR
HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
DTVREARTKADLSGKVVRDAVAAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH
RAGDAGKGFAVVAQEVRELAQRSANAAKEIKQLINTSAVAVGEGVKLVADTGVGLSEIEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
LVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAGLAQECAN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LQALLAQFQLGQQASALRETARHMQRVANPSRAPAAPVAAPPRARPVATRGNAALAVKGD
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
DWTEF
CCCCC
>Mature Secondary Structure 
SFSIRNILVGFFLTISLALAGFVGTQSWRSVNRASAFSEVAQLVSLDKLLFNALLNFRS
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGDSATALTLDPSKSAGSIASVAAARQKVDAAMTAFLTQSSSLEDARLQGPLKRVKDVY
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AQFVELRKKVDANVSQPLDRREGGLDKTVMTLGGDFLASLEAGSTALEGAVRSLDQGQTG
HHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCC
LIQLRSYGWSARALGGSATVVLNAAVAQNRPLTAQEMQQLGAFDAGAAFAWKATGDLVAH
HHHHHHCCCCHHCCCCCEEEEEEHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEC
ESTPQSLKDIYATADKTYFKGDFNTQRTKLIEDLNNGRTPTFTLDSWRTTVTENLGTIAK
CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
IASAAMDVLDANAEKAKQDAFIGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALSGGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQLEADAVANREQAERDRIELQ
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHH
QRAEAEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
TSVGQSVQTVNGGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEAR
HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
DTVREARTKADLSGKVVRDAVAAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH
RAGDAGKGFAVVAQEVRELAQRSANAAKEIKQLINTSAVAVGEGVKLVADTGVGLSEIEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
LVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAGLAQECAN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LQALLAQFQLGQQASALRETARHMQRVANPSRAPAAPVAAPPRARPVATRGNAALAVKGD
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
DWTEF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]