Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184504
Identifier: 159184504
GI number: 159184504
Start: 859966
End: 860151
Strand: Reverse
Name: 159184504
Synonym: Atu0861
Alternate gene names: NA
Gene position: 860151-859966 (Counterclockwise)
Preceding gene: 15888204
Following gene: 15888201
Centisome position: 30.27
GC content: 46.24
Gene sequence:
>186_bases ATGAATGGTGCGGCAACTTTCATCAAGCGGTTTTTCTTCATCGCCATCAAGCAGTTGTTGCGCCTTGAAACTGCCCTTAT AAGATCATCACAACCAGACTATGAAAAGGCCGCTTTCGCGAGGAACGGCCAAAGCATGCCAGTTACGCATTCATTCGGAC ATGACTTTTTACAAAATCCGCGTTGA
Upstream 100 bases:
>100_bases GACTTCGTTCATTCTTGCCTCCTGTTGAAAAACGACGCCAACATCGAATAACTGACGTTAACGTCAACGTAAAACAATCC AGTGCCGCATTCAAGCGGCC
Downstream 100 bases:
>100_bases TTTTTAAGGGTCGTGCATCAGCCGCAGGAGAAAATGGTCGATGTTGCAGGACGGACAGCTCTATATCGGCACCAGCCGCA ATCCGGACGACAGCCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MNGAATFIKRFFFIAIKQLLRLETALIRSSQPDYEKAAFARNGQSMPVTHSFGHDFLQNPR
Sequences:
>Translated_61_residues MNGAATFIKRFFFIAIKQLLRLETALIRSSQPDYEKAAFARNGQSMPVTHSFGHDFLQNPR >Mature_61_residues MNGAATFIKRFFFIAIKQLLRLETALIRSSQPDYEKAAFARNGQSMPVTHSFGHDFLQNPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6986; Mature: 6986
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAATFIKRFFFIAIKQLLRLETALIRSSQPDYEKAAFARNGQSMPVTHSFGHDFLQNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCC R C >Mature Secondary Structure MNGAATFIKRFFFIAIKQLLRLETALIRSSQPDYEKAAFARNGQSMPVTHSFGHDFLQNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA