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The map label for this gene is ytfH [H]

Identifier: 15888204

GI number: 15888204

Start: 860643

End: 861074

Strand: Reverse

Name: ytfH [H]

Synonym: Atu0863

Alternate gene names: 15888204

Gene position: 861074-860643 (Counterclockwise)

Preceding gene: 159184506

Following gene: 159184504

Centisome position: 30.3

GC content: 62.27

Gene sequence:

>432_bases
ATGAAACGGCACGCCGCCGACCCGGCCATCGAGAGCCGGCGCAAGGTTCCGCCGCCCACGGATACCCATCCGGCGATTGA
GGCGCTGGTTCAGGATATCATTGCGAAGGTGGCCGACAAATGGACGATGCTCATTCTGGAAGTGCTGGAAGAGCATGGGA
CGCAGCGCTTCACGCAGATCGGCAAACATGTGGGCAATATCAGCCAGAAGATGCTGACGAAAACGCTGCGGCAGATGGAA
AGCGACGGGCTGGTGCGCCGCACGGTGCACCCCGTCATTCCGCCGCATGTGGATTATGGTCTGACGACCCTTGGCCGCAC
ACTCGGCAGCGCCTTTTGCGGCGTGTGGATCTGGGCGGAGACGCACCATGCCGAAATAGAAGAGGCGCGGCGGCGGTTCA
ACGAACAGCCGCCGCGCCCTGCGATGGAGTAA

Upstream 100 bases:

>100_bases
AACATCCTTTGCTTGTTGGCTGAAAGGAAGTTAGCTATGATACTCTCCAATCGAAAGTAGGCACCCAAAAGATTTATACT
TACCCAAAGGAGAGTGTAAG

Downstream 100 bases:

>100_bases
ACTCGCCTCAAGCGAACTGGCTGAGGCCCGGCACCGAGGCGATCACCTGATCGACGGTCTCATCACCCGCATGCTGGCGG
GCAACGGCGATGGTTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKRHAADPAIESRRKVPPPTDTHPAIEALVQDIIAKVADKWTMLILEVLEEHGTQRFTQIGKHVGNISQKMLTKTLRQME
SDGLVRRTVHPVIPPHVDYGLTTLGRTLGSAFCGVWIWAETHHAEIEEARRRFNEQPPRPAME

Sequences:

>Translated_143_residues
MKRHAADPAIESRRKVPPPTDTHPAIEALVQDIIAKVADKWTMLILEVLEEHGTQRFTQIGKHVGNISQKMLTKTLRQME
SDGLVRRTVHPVIPPHVDYGLTTLGRTLGSAFCGVWIWAETHHAEIEEARRRFNEQPPRPAME
>Mature_143_residues
MKRHAADPAIESRRKVPPPTDTHPAIEALVQDIIAKVADKWTMLILEVLEEHGTQRFTQIGKHVGNISQKMLTKTLRQME
SDGLVRRTVHPVIPPHVDYGLTTLGRTLGSAFCGVWIWAETHHAEIEEARRRFNEQPPRPAME

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=100, Percent_Identity=36, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16240; Mature: 16240

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHAADPAIESRRKVPPPTDTHPAIEALVQDIIAKVADKWTMLILEVLEEHGTQRFTQI
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKHVGNISQKMLTKTLRQMESDGLVRRTVHPVIPPHVDYGLTTLGRTLGSAFCGVWIWAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
THHAEIEEARRRFNEQPPRPAME
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRHAADPAIESRRKVPPPTDTHPAIEALVQDIIAKVADKWTMLILEVLEEHGTQRFTQI
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKHVGNISQKMLTKTLRQMESDGLVRRTVHPVIPPHVDYGLTTLGRTLGSAFCGVWIWAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
THHAEIEEARRRFNEQPPRPAME
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]