Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184486
Identifier: 159184486
GI number: 159184486
Start: 833509
End: 834507
Strand: Direct
Name: 159184486
Synonym: Atu0834
Alternate gene names: NA
Gene position: 833509-834507 (Clockwise)
Preceding gene: 159184485
Following gene: 159184487
Centisome position: 29.33
GC content: 62.46
Gene sequence:
>999_bases ATGAACAATTCCGTTACCGTCGAAGTGACCCGCGGCAATCTCGTGGAAAGCCGCCATCAGGGTCTTGCCGTGGTGGTGGA TGGCGATGGCGGGGTGCTGTTTTCGGCCGGCGATATTGAGCGCGGGATCTTCCCGCGTTCCGCCTGCAAGGCCATGCAGG CGCTGCCGCTGGTGGAGAGCGGTGCGACGGATGCCTACGGTTTCGGCAACCGCGAACTGGCGCTGGCTTGCTCTTCCCAT TCCGGTGAAGACGCCCACGCGGAACTCGCCGCCGCCATGCTTGCGAAAGCGGGCCGGGATGTCGACACGCTGGAATGCGG CGCGCACTGGTCGTCGGACCAGAAAACCATCATTCATCAGGCCCGCACGCTGGAAAAGCCGACGGCGCTTCACAATAATT GCTCCGGCAAACATTCCGGCTTCATTTGCGCCTGCTGCCATACCGGCACGGATCCCAAAGGCTATGTCGGTTACGATCAT CCTCTGCAGCGGCAAATCCGCGCCACGATGGAGAGCCTGACGGGCGCGGCGCTCGGCCATGACAATTGCGGCGTGGATGG CTGCTCCATTCCCACCTATGCCGTGCCGCTCAAGGGGCTGGCGCATGGTTTCGCCAAAATGGCGACGGGCAGGGGGCTCG AGGCAGAACGCGCGAAAGCCTCGCGCCGCCTCATCGAGGCCTGCATGGCCGAACCTTTTTACGTGGCAGGCACGGGTCGC GCCTGCACGAAGCTGATGCAGATCGCGCCCGGCAAGATTTTCGCCAAGACCGGAGCGGAAGGCGTTTTCATCGCCGCCCT GCCGAATCAGGGGATTGCCATGGCGGTGAAATGCGAAGACGGCACGACACGCGCGGCAGAAGCCATGGTCACGGCCTTGC TTGCCCGCTATTTTGATGACGGCAGTGCCGAGCAGCAGGCTTTAAAAGGCATGGCGAACCGCCAGATGCGCAACTGGAAC GGCATCCATGTCGGCGATATCAGCGTTATCGGGCTTTAA
Upstream 100 bases:
>100_bases CAGCAGCAGACGTTTCGCAAATTTCACTGATAGCCCCGTGCATCGAAAAATCAGTTGCGGTATCAACGACATAAAATCAG AATTTTTTGAGGCTGAGAGA
Downstream 100 bases:
>100_bases ATAACCTTTGACGCGGCCGTTTACCGGCACGATGATGCGGTGTCCTGCGTGTGATGGCTATCCCATGGCCGCCGGCAGGC GCGGCGTCCGCATGGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNNSVTVEVTRGNLVESRHQGLAVVVDGDGGVLFSAGDIERGIFPRSACKAMQALPLVESGATDAYGFGNRELALACSSH SGEDAHAELAAAMLAKAGRDVDTLECGAHWSSDQKTIIHQARTLEKPTALHNNCSGKHSGFICACCHTGTDPKGYVGYDH PLQRQIRATMESLTGAALGHDNCGVDGCSIPTYAVPLKGLAHGFAKMATGRGLEAERAKASRRLIEACMAEPFYVAGTGR ACTKLMQIAPGKIFAKTGAEGVFIAALPNQGIAMAVKCEDGTTRAAEAMVTALLARYFDDGSAEQQALKGMANRQMRNWN GIHVGDISVIGL
Sequences:
>Translated_332_residues MNNSVTVEVTRGNLVESRHQGLAVVVDGDGGVLFSAGDIERGIFPRSACKAMQALPLVESGATDAYGFGNRELALACSSH SGEDAHAELAAAMLAKAGRDVDTLECGAHWSSDQKTIIHQARTLEKPTALHNNCSGKHSGFICACCHTGTDPKGYVGYDH PLQRQIRATMESLTGAALGHDNCGVDGCSIPTYAVPLKGLAHGFAKMATGRGLEAERAKASRRLIEACMAEPFYVAGTGR ACTKLMQIAPGKIFAKTGAEGVFIAALPNQGIAMAVKCEDGTTRAAEAMVTALLARYFDDGSAEQQALKGMANRQMRNWN GIHVGDISVIGL >Mature_332_residues MNNSVTVEVTRGNLVESRHQGLAVVVDGDGGVLFSAGDIERGIFPRSACKAMQALPLVESGATDAYGFGNRELALACSSH SGEDAHAELAAAMLAKAGRDVDTLECGAHWSSDQKTIIHQARTLEKPTALHNNCSGKHSGFICACCHTGTDPKGYVGYDH PLQRQIRATMESLTGAALGHDNCGVDGCSIPTYAVPLKGLAHGFAKMATGRGLEAERAKASRRLIEACMAEPFYVAGTGR ACTKLMQIAPGKIFAKTGAEGVFIAALPNQGIAMAVKCEDGTTRAAEAMVTALLARYFDDGSAEQQALKGMANRQMRNWN GIHVGDISVIGL
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34890; Mature: 34890
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSVTVEVTRGNLVESRHQGLAVVVDGDGGVLFSAGDIERGIFPRSACKAMQALPLVES CCCCEEEEEECCCHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCC GATDAYGFGNRELALACSSHSGEDAHAELAAAMLAKAGRDVDTLECGAHWSSDQKTIIHQ CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH ARTLEKPTALHNNCSGKHSGFICACCHTGTDPKGYVGYDHPLQRQIRATMESLTGAALGH HHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DNCGVDGCSIPTYAVPLKGLAHGFAKMATGRGLEAERAKASRRLIEACMAEPFYVAGTGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCH ACTKLMQIAPGKIFAKTGAEGVFIAALPNQGIAMAVKCEDGTTRAAEAMVTALLARYFDD HHHHHHHHCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC GSAEQQALKGMANRQMRNWNGIHVGDISVIGL CCHHHHHHHHHHHHHHCCCCCEEECCEEEEEC >Mature Secondary Structure MNNSVTVEVTRGNLVESRHQGLAVVVDGDGGVLFSAGDIERGIFPRSACKAMQALPLVES CCCCEEEEEECCCHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCC GATDAYGFGNRELALACSSHSGEDAHAELAAAMLAKAGRDVDTLECGAHWSSDQKTIIHQ CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH ARTLEKPTALHNNCSGKHSGFICACCHTGTDPKGYVGYDHPLQRQIRATMESLTGAALGH HHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DNCGVDGCSIPTYAVPLKGLAHGFAKMATGRGLEAERAKASRRLIEACMAEPFYVAGTGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCH ACTKLMQIAPGKIFAKTGAEGVFIAALPNQGIAMAVKCEDGTTRAAEAMVTALLARYFDD HHHHHHHHCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC GSAEQQALKGMANRQMRNWNGIHVGDISVIGL CCHHHHHHHHHHHHHHCCCCCEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA