Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184433
Identifier: 159184433
GI number: 159184433
Start: 718423
End: 718884
Strand: Direct
Name: 159184433
Synonym: Atu0718
Alternate gene names: NA
Gene position: 718423-718884 (Clockwise)
Preceding gene: 15888061
Following gene: 159184434
Centisome position: 25.28
GC content: 53.68
Gene sequence:
>462_bases ATGAAGATCAACGACGCGATCAGGGCCGATATGGAAAACTCGGTACTCTGCTGGCTTGCGACCGTCGATGATGATGGCAC TCCCAGTGTGACACCGAAGGAGATATTCACCAGCTACGGCGAGGAACATATTGTCATCGCTGACATTGCTTCGTCACACA GCGTCCACAACGCCATCGCCCGCCCGAAAGTCTGCGTCAGCTTCGTTGATGTATTTCGACAGAAGGGATTCAAACTCACC GGCAATGCCAGAATATTGGCACCCGGCAACGCGGATTTTCAGGCGTTCGGTGCCGACCTACTGCATATGGCGGGCGCGGA TTTTCCGATACGGAATATTATTGCTGTCAAAATCGAAAGCGTTTCCCGCATATGGGCACCGAGCTACAAGCTGTTTCCCG AGCGCAGCGAGAATGAGAGAATGCAGAGCGCTTATGCGACCTATGGGGTCCAGCCTGTCTAG
Upstream 100 bases:
>100_bases ATAGCTTCGCCGGAAGGTTGGTGTATGGGGTGGCGGAAATGATTGATTGAGTTGCAAAAGATCGGCTCACGTCGGCGCTG GATTGAAAGGGAGGAACATT
Downstream 100 bases:
>100_bases ACGCTTTGATATCAAAAATCTTCATTGGAACGATACGTGGGCCGCAATGGATTTCCATGCTGTGTGACATTAGTCTCGTC GCAACACAGTCGCCCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKINDAIRADMENSVLCWLATVDDDGTPSVTPKEIFTSYGEEHIVIADIASSHSVHNAIARPKVCVSFVDVFRQKGFKLT GNARILAPGNADFQAFGADLLHMAGADFPIRNIIAVKIESVSRIWAPSYKLFPERSENERMQSAYATYGVQPV
Sequences:
>Translated_153_residues MKINDAIRADMENSVLCWLATVDDDGTPSVTPKEIFTSYGEEHIVIADIASSHSVHNAIARPKVCVSFVDVFRQKGFKLT GNARILAPGNADFQAFGADLLHMAGADFPIRNIIAVKIESVSRIWAPSYKLFPERSENERMQSAYATYGVQPV >Mature_153_residues MKINDAIRADMENSVLCWLATVDDDGTPSVTPKEIFTSYGEEHIVIADIASSHSVHNAIARPKVCVSFVDVFRQKGFKLT GNARILAPGNADFQAFGADLLHMAGADFPIRNIIAVKIESVSRIWAPSYKLFPERSENERMQSAYATYGVQPV
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16858; Mature: 16858
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINDAIRADMENSVLCWLATVDDDGTPSVTPKEIFTSYGEEHIVIADIASSHSVHNAIA CCCCHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHC RPKVCVSFVDVFRQKGFKLTGNARILAPGNADFQAFGADLLHMAGADFPIRNIIAVKIES CHHHHHHHHHHHHHCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHEEEEEEHH VSRIWAPSYKLFPERSENERMQSAYATYGVQPV HHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKINDAIRADMENSVLCWLATVDDDGTPSVTPKEIFTSYGEEHIVIADIASSHSVHNAIA CCCCHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHC RPKVCVSFVDVFRQKGFKLTGNARILAPGNADFQAFGADLLHMAGADFPIRNIIAVKIES CHHHHHHHHHHHHHCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHEEEEEEHH VSRIWAPSYKLFPERSENERMQSAYATYGVQPV HHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA