Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is guaB [H]
Identifier: 159184394
GI number: 159184394
Start: 612499
End: 613872
Strand: Direct
Name: guaB [H]
Synonym: Atu0624
Alternate gene names: 159184394
Gene position: 612499-613872 (Clockwise)
Preceding gene: 159184393
Following gene: 15887966
Centisome position: 21.55
GC content: 63.25
Gene sequence:
>1374_bases CTGAACCTGCCGATCCTCTCTTCCGCCATGGATACGGTCACCGAAGGCCGCCTCGCCATCGCCATGGCCCAGGCCGGCGG CATCGGTGTCATTCACCGTAACCTTACCCCCATCGAGCAGGCCGAAGAAGTGCGGCAGGTGAAGAAGTTCGAAAGCGGCA TGGTCGTCAATCCGGTCACCATCGGCCCCGACGCGACGCTTGCCGAAGCGCAGGCATTGATGAAGGCGCACGGCATTTCC GGCATTCCGGTGGTCGAAAACGGCGGTGCCGGCGGCCACAAGAATGGCCGCCTCGTCGGCATTCTCACTAACCGCGACGT GCGCTTCGCCTCCGATCCGCAGCAGAAGATCTACGAACTGATGACCCGCGAAAATCTGGTCACGGTCAAGGAAAGCAGCG TCGATCAGCAGGAAGCGCGCCGCCTGCTGCACAAGCACCGCATTGAAAAGCTGCTGGTTGTGGACGGAAAGGGCAATTGC GTCGGTCTCATCACCGTTAAGGATATTGAGAAGTCGCAGCTAAACCCCAATGCCACCAAGGATGCGCAGGGCCGCCTTCG CGCCGCCGCCGCCATCAGCGTGGGTGCTGATGCCATCGAGCGCGCCGAACGCCTCATCGATGCCGGCGTTGACCTTCTGG TCGTTGATACCGCGCATGGCCATTCGCAGCGGGTTCTCGATGCCGTGGCGCAGGTCAAGAAGATGTCGAACTCGGTTCGC ATCATCGCCGGCAATGTCGCCACTGCCGACGGCACCAAGGCGCTGATCGATGCCGGTGCGGACGCCGTCAAGGTCGGTAT CGGCCCCGGCTCCATCTGCACCACCCGTATCGTCGCCGGCGTTGGCGTTCCGCAGCTTGCCGCAGTCATGGCCGCAGTCG AAGCGGCCAGCCTCGCCGATATTCCTGTCATCGCCGATGGCGGCATCAAGTTCTCGGGCGATCTGGCCAAGGCGATCGCC GCCGGCGCTTCCGCCGTCATGATCGGCTCGCTGCTCGCCGGTACGGATGAAAGCCCGGGCGAAGTGTTCCTGTATCAGGG CCGTTCCTTCAAGGCCTATCGCGGCATGGGTTCCGTTGGCGCCATGGCGCGCGGTTCCGCTGACCGTTATTTCCAGGCGG AAGTGCGCGATACGCTGAAGCTCGTGCCTGAGGGTATCGAAGGTCAGGTGCCCTATAAGGGCCCAGTCTCCGGCGTCCTG CACCAGCTGGCCGGCGGCCTCAAGGCTGCCATGGGTTATGTCGGTGGCAGCAACATCAAGGAATTCCAGGAGCGCGCCAC CTTCGTGCGCATTTCCAGCGCCGGCCTGCGGGAAAGCCACGCCCATGACGTGACAATCACGCGTGAAAGCCCGAACTATC CGGGCGCGGTTTGA
Upstream 100 bases:
>100_bases GGACGCTCTCACATTTGACGATGTGTTGCTGCAACCCGGACATTCCGAAGTCATGCCGGGACAGACAAATATCGCCACCC GCATTGCCCGCGATATCGAT
Downstream 100 bases:
>100_bases TCTTTCGAGCCGAATCCGTAAAAAGATAGGCTAGATATTTGGCGCTCCCCGATCTCAAGCCGGATCGGGGAGCGTTTTCA TGATGGGGGGAAAGCATGTC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNLPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLTPIEQAEEVRQVKKFESGMVVNPVTIGPDATLAEAQALMKAHGIS GIPVVENGGAGGHKNGRLVGILTNRDVRFASDPQQKIYELMTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNC VGLITVKDIEKSQLNPNATKDAQGRLRAAAAISVGADAIERAERLIDAGVDLLVVDTAHGHSQRVLDAVAQVKKMSNSVR IIAGNVATADGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLAAVMAAVEAASLADIPVIADGGIKFSGDLAKAIA AGASAVMIGSLLAGTDESPGEVFLYQGRSFKAYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVPYKGPVSGVL HQLAGGLKAAMGYVGGSNIKEFQERATFVRISSAGLRESHAHDVTITRESPNYPGAV
Sequences:
>Translated_457_residues MNLPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLTPIEQAEEVRQVKKFESGMVVNPVTIGPDATLAEAQALMKAHGIS GIPVVENGGAGGHKNGRLVGILTNRDVRFASDPQQKIYELMTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNC VGLITVKDIEKSQLNPNATKDAQGRLRAAAAISVGADAIERAERLIDAGVDLLVVDTAHGHSQRVLDAVAQVKKMSNSVR IIAGNVATADGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLAAVMAAVEAASLADIPVIADGGIKFSGDLAKAIA AGASAVMIGSLLAGTDESPGEVFLYQGRSFKAYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVPYKGPVSGVL HQLAGGLKAAMGYVGGSNIKEFQERATFVRISSAGLRESHAHDVTITRESPNYPGAV >Mature_457_residues MNLPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLTPIEQAEEVRQVKKFESGMVVNPVTIGPDATLAEAQALMKAHGIS GIPVVENGGAGGHKNGRLVGILTNRDVRFASDPQQKIYELMTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNC VGLITVKDIEKSQLNPNATKDAQGRLRAAAAISVGADAIERAERLIDAGVDLLVVDTAHGHSQRVLDAVAQVKKMSNSVR IIAGNVATADGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLAAVMAAVEAASLADIPVIADGGIKFSGDLAKAIA AGASAVMIGSLLAGTDESPGEVFLYQGRSFKAYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVPYKGPVSGVL HQLAGGLKAAMGYVGGSNIKEFQERATFVRISSAGLRESHAHDVTITRESPNYPGAV
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=425, Percent_Identity=40, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI217035146, Length=423, Percent_Identity=40.4255319148936, Blast_Score=289, Evalue=4e-78, Organism=Homo sapiens, GI34328930, Length=423, Percent_Identity=40.4255319148936, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI34328928, Length=423, Percent_Identity=40.4255319148936, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI217035152, Length=423, Percent_Identity=40.4255319148936, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI156616279, Length=423, Percent_Identity=40.4255319148936, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI217035148, Length=423, Percent_Identity=39.4799054373522, Blast_Score=275, Evalue=5e-74, Organism=Homo sapiens, GI217035150, Length=423, Percent_Identity=36.6430260047281, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=39.8373983739837, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=39.8373983739837, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=39.8373983739837, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=39.8373983739837, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI156104880, Length=257, Percent_Identity=37.7431906614786, Blast_Score=166, Evalue=5e-41, Organism=Escherichia coli, GI1788855, Length=458, Percent_Identity=57.4235807860262, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI1786293, Length=237, Percent_Identity=39.662447257384, Blast_Score=164, Evalue=1e-41, Organism=Caenorhabditis elegans, GI71994385, Length=443, Percent_Identity=36.117381489842, Blast_Score=258, Evalue=6e-69, Organism=Caenorhabditis elegans, GI71994389, Length=393, Percent_Identity=37.9134860050891, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17560440, Length=247, Percent_Identity=39.6761133603239, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323585, Length=433, Percent_Identity=39.4919168591224, Blast_Score=299, Evalue=7e-82, Organism=Saccharomyces cerevisiae, GI6322012, Length=458, Percent_Identity=38.646288209607, Blast_Score=294, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6323464, Length=432, Percent_Identity=40.9722222222222, Blast_Score=291, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6319352, Length=312, Percent_Identity=39.4230769230769, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6319353, Length=117, Percent_Identity=41.025641025641, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641071, Length=427, Percent_Identity=40.5152224824356, Blast_Score=292, Evalue=3e-79, Organism=Drosophila melanogaster, GI24641073, Length=427, Percent_Identity=40.5152224824356, Blast_Score=292, Evalue=3e-79, Organism=Drosophila melanogaster, GI28571163, Length=444, Percent_Identity=38.963963963964, Blast_Score=285, Evalue=5e-77,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 47593; Mature: 47593
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLTPIEQAEEVRQVKKFESGMVVNPVT CCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCEE IGPDATLAEAQALMKAHGISGIPVVENGGAGGHKNGRLVGILTNRDVRFASDPQQKIYEL ECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHH MTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNCVGLITVKDIEKSQLNPNATK HHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCCCCCCC DAQGRLRAAAAISVGADAIERAERLIDAGVDLLVVDTAHGHSQRVLDAVAQVKKMSNSVR CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEE IIAGNVATADGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLAAVMAAVEAASLAD EEECCEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC IPVIADGGIKFSGDLAKAIAAGASAVMIGSLLAGTDESPGEVFLYQGRSFKAYRGMGSVG CCEEECCCEEECCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCCCCCC AMARGSADRYFQAEVRDTLKLVPEGIEGQVPYKGPVSGVLHQLAGGLKAAMGYVGGSNIK HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH EFQERATFVRISSAGLRESHAHDVTITRESPNYPGAV HHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MNLPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLTPIEQAEEVRQVKKFESGMVVNPVT CCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCEE IGPDATLAEAQALMKAHGISGIPVVENGGAGGHKNGRLVGILTNRDVRFASDPQQKIYEL ECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHH MTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNCVGLITVKDIEKSQLNPNATK HHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCCCCCCC DAQGRLRAAAAISVGADAIERAERLIDAGVDLLVVDTAHGHSQRVLDAVAQVKKMSNSVR CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEE IIAGNVATADGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLAAVMAAVEAASLAD EEECCEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC IPVIADGGIKFSGDLAKAIAAGASAVMIGSLLAGTDESPGEVFLYQGRSFKAYRGMGSVG CCEEECCCEEECCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCCCCCC AMARGSADRYFQAEVRDTLKLVPEGIEGQVPYKGPVSGVLHQLAGGLKAAMGYVGGSNIK HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH EFQERATFVRISSAGLRESHAHDVTITRESPNYPGAV HHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA